RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 C5orf49A4QMS7 147 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 GMNCA6NCL1 334 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 J3KTA2 159 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 MT-ND5P03915 603 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 MAKP20794 623 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 IFNA8P32881 189 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 MPV17P39210 176 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 GDI2P50395 445 aaKnown RBP14.56□□□□□ -0.08
TRIM39-209ENST00000428728 CTXN1P60606 82 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 RPL27P61353 136 aaKnown RBP14.56□□□□□ -0.08
TRIM39-209ENST00000428728 LMO4P61968 165 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 SELENOWP63302 87 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 SLC25A47Q6Q0C1 308 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 THSD4Q6ZMP0 1018 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 RFPL4BQ6ZWI9 263 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 USP51Q70EK9 711 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 OR13C2Q8NGS9 318 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 IPCEF1Q8WWN9 437 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-209ENST00000428728 POM121L2Q96KW2 1035 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 ALG12Q9BV10 488 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 OCEL1Q9H607 264 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 SAP30LQ9HAJ7 183 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 DECR2Q9NUI1 292 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 METRNQ9UJH8 293 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 SNX13Q9Y5W8 968 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 CACNG2Q9Y698 323 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 DYSFO75923 2080 aa14.56□□□□□ -0.08
TRIM39-209ENST00000428728 LOC100509620A0A075B734 347 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 H7C1C5 153 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 ZNF682O95780 498 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 IGHV3-13P01766 116 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 IGHMP01871 453 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 LAP3P28838 519 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 GCH1P30793 250 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 ZNF81P51508 661 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 LCN6P62502 163 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 PSG4Q00888 419 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 TEKQ02763 1124 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 TAF11Q15544 211 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 ZNF718Q3SXZ3 478 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 TMEM255AQ5JRV8 349 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 THEM4Q5T1C6 240 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 ZNF771Q7L3S4 317 aaPredicted RBP14.55□□□□□ -0.08
TRIM39-209ENST00000428728 NRMQ8IXM6 262 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 OFCC1Q8IZS5 231 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 OR51A7Q8NH64 312 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 SLC25A40Q8TBP6 338 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 LZICQ8WZA0 190 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 FNDC11Q9BVV2 318 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 ZNF665Q9H7R5 613 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 MAN2C1Q9NTJ4 1040 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 CMTM6Q9NX76 183 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 NKIRAS2Q9NYR9 191 aa14.55□□□□□ -0.08
TRIM39-209ENST00000428728 EIF3KQ9UBQ5 218 aaKnown RBP14.55□□□□□ -0.08
TRIM39-209ENST00000428728 EFCAB9A8MZ26 197 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 CLDN25C9JDP6 229 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 SPRY3O43610 288 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 RGS9O75916 674 aaPredicted RBP14.54□□□□□ -0.08
TRIM39-209ENST00000428728 IFNW1P05000 195 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 CRYBB2P43320 205 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 GPR4P46093 362 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 TRAM2Q15035 370 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 MOGQ16653 247 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 ABHD4Q8TB40 342 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 RBP7Q96R05 134 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 OR2H1Q9GZK4 316 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 OR2J1Q9GZK6 312 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 WNT5BQ9H1J7 359 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 WIPI2Q9Y4P8 454 aa14.54□□□□□ -0.08
TRIM39-209ENST00000428728 TRAV20A0A0B4J274 112 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 PLSCR5A0PG75 271 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 ZSCAN5BA6NJL1 495 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 IGHV1-46P01743 117 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 PPP1CBP62140 327 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 GUCY1A3Q02108 690 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 FAM27BQ5VT28 67 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 FAM205BPQ63HN1 556 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 ZNF774Q6NX45 483 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 FAHD2BQ6P2I3 314 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-209ENST00000428728 ZNF730Q6ZMV8 503 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 ARPINQ7Z6K5 226 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 OAFQ86UD1 273 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-209ENST00000428728 LRRC75AQ8NAA5 344 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 KLF14Q8TD94 323 aaPredicted RBP14.53□□□□□ -0.08
TRIM39-209ENST00000428728 GEMIN6Q8WXD5 167 aaKnown RBP14.53□□□□□ -0.08
TRIM39-209ENST00000428728 RAB39BQ96DA2 213 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 FAHD2AQ96GK7 314 aa14.53□□□□□ -0.08
TRIM39-209ENST00000428728 MARS2Q96GW9 593 aaKnown RBP14.53□□□□□ -0.08
TRIM39-209ENST00000428728 A6NIZ1 184 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 CXCR6O00574 342 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 FFAR1O14842 300 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 GSTA4O15217 222 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 VENTXO95231 258 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 MPZL1O95297 269 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 PNPP00491 289 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 CST2P09228 141 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 MSR1P21757 451 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 GUCA1AP43080 201 aaPredicted RBP14.52□□□□□ -0.09
TRIM39-209ENST00000428728 MMP15P51511 669 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms