RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 RASGEF1BQ0VAM2 473 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 MRPL28Q13084 256 aaKnown RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ACER2Q5QJU3 275 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ZNF57Q68EA5 555 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 LRFN4Q6PJG9 635 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 TRILQ7L0X0 811 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ESX1Q8N693 406 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 OR52N5Q8NH56 324 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 LGALS14Q8TCE9 139 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 RNF128Q8TEB7 428 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 SLC25A43Q8WUT9 341 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 LIN37Q96GY3 246 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 DDA1Q9BW61 102 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 MRPL13Q9BYD1 178 aaKnown RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 SLC22A4Q9H015 551 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ZCCHC4Q9H5U6 513 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 TMEM9BQ9NQ34 198 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ABRACLQ9P1F3 81 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 HDGFL3Q9Y3E1 203 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 V9GY05 133 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 EML6Q6ZMW3 1958 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 TRBV5-5A0A0J9YX44 114 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 A0A1W2PQ72 361 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 NPIPB13A6NJU9 1138 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 NPIPB4C9JG80 1138 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 SEC14L5O43304 696 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 TRAF3IP2O43734 574 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 SLC43A1O75387 559 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 ADRB1P08588 477 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 ADRA2CP18825 462 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 MAPK3P27361 379 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 CDAP32320 146 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 KIR2DL3P43628 341 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 CD97P48960 835 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 RNASE12Q5GAN4 147 aaKnown RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 MTFR2Q6P444 385 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 YRDCQ86U90 279 aaKnown RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 GLCCI1Q86VQ1 547 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 EGFL6Q8IUX8 553 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 IZUMO1Q8IYV9 350 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 HAVCR2Q8TDQ0 301 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 TSEN15Q8WW01 171 aaKnown RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 C11orf40Q8WZ69 217 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 MIB2Q96AX9 1013 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 SGCZQ96LD1 299 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 THAP7Q9BT49 309 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 SLITRK2Q9H156 845 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 LIN7BQ9HAP6 207 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 FANCFQ9NPI8 374 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 EMC9Q9Y3B6 208 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 A0A087WZY1 265 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 A0A1W2PPL8 197 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 PDCD5O14737 125 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 EEF1E1O43324 174 aaKnown RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 CBR3O75828 277 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 HPP00738 406 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 IGHG1P01857 330 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 P04436 131 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 RAB40ALP0C0E4 278 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 PTBP1P26599 531 aaKnown RBP eCLIP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 RBMS1P29558 406 aaKnown RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 TPTEP56180 551 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 TEX30Q5JUR7 227 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 HES3Q5TGS1 186 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 CDCP2Q5VXM1 449 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 FAM205BPQ63HN1 556 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 TMEM81Q6P7N7 255 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 FCRLAQ7L513 359 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 GLB1L2Q8IW92 636 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 ZNF454Q8N9F8 522 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 ST7LQ8TDW4 575 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 SLC25A44Q96H78 314 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 THOC3Q96J01 351 aaKnown RBP9.28□□□□□ -0.92
HDAC9-210ENST00000428307 OXGR1Q96P68 337 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 STMN3Q9NZ72 180 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 SPATA2Q9UM82 520 aa9.28□□□□□ -0.92
HDAC9-210ENST00000428307 CCDC187A0A096LP49 1063 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 AQP7P3A6NL99 342 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF726A6NNF4 738 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 AIPO00170 330 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 GPR171O14626 319 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF254O75437 659 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 SERPINA7P05543 415 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 RFPL3SP0C7P2 107 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 PGA4P0DJD7 388 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 PGA3P0DJD8 388 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 SLC35A1P78382 337 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 RIN1Q13671 783 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 THEM4Q5T1C6 240 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 STPG1Q5TH74 334 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 TMPRSS12Q86WS5 348 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-210ENST00000428307 SERPINA12Q8IW75 414 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 BEST3Q8N1M1 668 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 ARMC10Q8N2F6 343 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 OR10H5Q8NGA6 315 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 PSMF1Q92530 271 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF775Q96BV0 537 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-210ENST00000428307 UCN2Q96RP3 112 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms