RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZNF584Q8IVC4 421 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 SKA3Q8IX90 412 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 FAM86B1Q8N7N1 296 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 OR51A7Q8NH64 312 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 MOSPD2Q8NHP6 518 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 DNAJC9Q8WXX5 260 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 MRPL24Q96A35 216 aaKnown RBP7.9□□□□□ -1.14
SMC1A-203ENST00000428014 RSRC1Q96IZ7 334 aaKnown RBP7.9□□□□□ -1.14
SMC1A-203ENST00000428014 TSPAN32Q96QS1 320 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 DCLRE1CQ96SD1 692 aaKnown RBP7.9□□□□□ -1.14
SMC1A-203ENST00000428014 DOK1Q99704 481 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 DGCR6LQ9BY27 220 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 RACGAP1Q9H0H5 632 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 YY1AP1Q9H869 796 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 KCNG2Q9UJ96 466 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 NDRG4Q9ULP0 352 aaKnown RBP7.9□□□□□ -1.14
SMC1A-203ENST00000428014 CMAHPQ9Y471 501 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 TIMM10BQ9Y5J6 103 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 LYVE1Q9Y5Y7 322 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 ATP23Q9Y6H3 246 aa7.9□□□□□ -1.14
SMC1A-203ENST00000428014 ABCA2Q9BZC7 2435 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 TRBV4-1A0A0J9YWV2 114 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 LOC390937A0A1W2PQ73 354 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 A0A1W2PR80 420 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 ZNF503-AS2A6NEH8 195 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 UNC119BA6NIH7 251 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 SYNGR3O43761 229 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 PIP5K1CO60331 668 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 IGHV4-39P01824 125 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 HLA-HP01893 362 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 OR4A8P0C604 315 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 CD79AP11912 226 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 TCN1P20061 433 aaPredicted RBP7.89□□□□□ -1.15
SMC1A-203ENST00000428014 GIFP27352 417 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 CALCRP30988 508 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 RRM2P31350 389 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 BLVRAP53004 296 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 FXYD6P3P58550 94 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 SELENOVP59797 346 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 GALK2Q01415 458 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 LOXL1Q08397 574 aaPredicted RBP7.89□□□□□ -1.15
SMC1A-203ENST00000428014 SPOCK1Q08629 439 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 CD47Q08722 323 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 AQP6Q13520 282 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 MELKQ14680 651 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 SEC23BQ15437 767 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 CLEC12BQ2HXU8 276 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 TBC1D28Q2M2D7 210 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 FGD3Q5JSP0 725 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 CARD17Q5XLA6 110 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 OR2T5Q6IEZ7 315 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 ZNF620Q6ZNG0 422 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 RASSF6Q6ZTQ3 369 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 RHOUQ7L0Q8 258 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 ZBTB46Q86UZ6 589 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 WDFY1Q8IWB7 410 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 RNF148Q8N7C7 305 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 PAPD5Q8NDF8 572 aaKnown RBP7.89□□□□□ -1.15
SMC1A-203ENST00000428014 SLC30A7Q8NEW0 376 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 OR4C15Q8NGM1 316 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 OR13C2Q8NGS9 318 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 OR2T29Q8NH02 315 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 GNPDA2Q8TDQ7 276 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 ITFG2Q969R8 447 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 NRBF2Q96F24 287 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 PERPQ96FX8 193 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 Q96MF0 132 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 ZNF570Q96NI8 536 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 BTBD10Q9BSF8 475 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 CACNG6Q9BXT2 260 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 RAB1BQ9H0U4 201 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 POLE4Q9NR33 117 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 TBCCD1Q9NVR7 557 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 TMEM160Q9NX00 188 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 SLCO1C1Q9NYB5 712 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 RHCGQ9UBD6 479 aa7.89□□□□□ -1.15
SMC1A-203ENST00000428014 NIPBLQ6KC79 2804 aaeCLIP7.88□□□□□ -1.15
SMC1A-203ENST00000428014 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.88□□□□□ -1.151e-8■■■■■ 59.6
SMC1A-203ENST00000428014 ZANQ9Y493 2812 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 TRAV27A0A087WT01 109 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 GYG2O15488 501 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 TLX2O43763 284 aaPredicted RBP7.88□□□□□ -1.15
SMC1A-203ENST00000428014 OR10H3O60404 316 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 KHDRBS3O75525 346 aaKnown RBP7.88□□□□□ -1.15
SMC1A-203ENST00000428014 SERPINI2O75830 405 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 ZNF26P17031 533 aaPredicted RBP7.88□□□□□ -1.15
SMC1A-203ENST00000428014 LAP3P28838 519 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 RPL4P36578 427 aaKnown RBP7.88□□□□□ -1.15
SMC1A-203ENST00000428014 YAP1P46937 504 aaKnown RBP7.88□□□□□ -1.15
SMC1A-203ENST00000428014 RGS6P49758 472 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 HIST1H3AP68431 136 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 SPIBQ01892 262 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 GLO1Q04760 184 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 BNIP1Q12981 228 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 KRR1Q13601 381 aaKnown RBP7.88□□□□□ -1.15
SMC1A-203ENST00000428014 MICAQ29983 383 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 PCGF3Q3KNV8 242 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 MESTQ5EB52 335 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 HIST2H3PS2Q5TEC6 136 aa7.88□□□□□ -1.15
SMC1A-203ENST00000428014 MBNL2Q5VZF2 373 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms