RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 MIPOL1Q8TD10 442 aa7.49□□□□□ -1.21
LSG1-202ENST00000427461 WIPF2Q8TF74 440 aaPredicted RBP7.49□□□□□ -1.21
LSG1-202ENST00000427461 POM121L2Q96KW2 1035 aa7.49□□□□□ -1.21
LSG1-202ENST00000427461 OR5M11Q96RB7 305 aa7.49□□□□□ -1.21
LSG1-202ENST00000427461 POFUT1Q9H488 388 aa7.49□□□□□ -1.21
LSG1-202ENST00000427461 A4GALTQ9NPC4 353 aa7.49□□□□□ -1.21
LSG1-202ENST00000427461 INPP5EQ9NRR6 644 aa7.49□□□□□ -1.21
LSG1-202ENST00000427461 EIF3KQ9UBQ5 218 aaKnown RBP7.49□□□□□ -1.21
LSG1-202ENST00000427461 CTSZQ9UBR2 303 aa7.49□□□□□ -1.21
LSG1-202ENST00000427461 DNAJB11Q9UBS4 358 aa7.49□□□□□ -1.21
LSG1-202ENST00000427461 A0A096LPI6 279 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 CDHR4A6H8M9 788 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 FARS2O95363 451 aaKnown RBP7.48□□□□□ -1.21
LSG1-202ENST00000427461 PF4P02776 101 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 LIPFP07098 398 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 RPS4Y1P22090 263 aaKnown RBP7.48□□□□□ -1.21
LSG1-202ENST00000427461 ARRB2P32121 409 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 PSMB10P40306 273 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 ERFP50548 548 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 BIDP55957 195 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 HPCAP84074 193 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 HOXC5Q00444 222 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 HSF2Q03933 536 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 DCTN2Q13561 401 aaKnown RBP7.48□□□□□ -1.21
LSG1-202ENST00000427461 FAM69AQ5T7M9 428 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 ZNF836Q6ZNA1 936 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 VMO1Q7Z5L0 202 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 SLC22A9Q8IVM8 553 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 OR5R1Q8NH85 324 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 AKR7LQ8NHP1 331 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 TMEM54Q969K7 222 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 C3orf30Q96M34 536 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 RCHY1Q96PM5 261 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 DUSP26Q9BV47 211 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 SMURF1Q9HCE7 757 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 ATAD3AQ9NVI7 634 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 GLTPQ9NZD2 209 aa7.48□□□□□ -1.21
LSG1-202ENST00000427461 LSM4Q9Y4Z0 139 aaKnown RBP7.48□□□□□ -1.21
LSG1-202ENST00000427461 A0A087WUJ7 227 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 LRRN3E7EW58 273 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 HMGN4O00479 90 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 CHST1O43916 411 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 FCN3O75636 299 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 DUS4LO95620 317 aaKnown RBP7.47□□□□□ -1.21
LSG1-202ENST00000427461 AGR2O95994 175 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 ZNF26P17031 533 aaPredicted RBP7.47□□□□□ -1.21
LSG1-202ENST00000427461 AHCYP23526 432 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 PAX6P26367 422 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 RPL3P39023 403 aaKnown RBP7.47□□□□□ -1.21
LSG1-202ENST00000427461 PMELP40967 661 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 KLRD1Q13241 179 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 TCTEX1D4Q5JR98 221 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 OR4F3Q6IEY1 312 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 CRIP3Q6Q6R5 217 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 DCDC5Q6ZRR9 648 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 SERPINA11Q86U17 422 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 MOGAT3Q86VF5 341 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 ZNF440Q8IYI8 595 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 CLIP4Q8N3C7 705 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 PNLDC1Q8NA58 520 aaKnown RBP7.47□□□□□ -1.21
LSG1-202ENST00000427461 ATG16L2Q8NAA4 619 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 OR10AD1Q8NGE0 317 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 VANGL1Q8TAA9 524 aaPredicted RBP7.47□□□□□ -1.21
LSG1-202ENST00000427461 RORBQ92753 470 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 TFAP2CQ92754 450 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 NKX3-1Q99801 234 aaPredicted RBP7.47□□□□□ -1.21
LSG1-202ENST00000427461 ERP44Q9BS26 406 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 C1orf50Q9BV19 199 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 RANBP3Q9H6Z4 567 aaPredicted RBP7.47□□□□□ -1.21
LSG1-202ENST00000427461 ZNF702PQ9H963 129 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 SIRT7Q9NRC8 400 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 TMCC3Q9ULS5 477 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 PPP2R2CQ9Y2T4 447 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 CAB39Q9Y376 341 aaPredicted RBP7.47□□□□□ -1.21
LSG1-202ENST00000427461 TMED5Q9Y3A6 229 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 CHST2Q9Y4C5 530 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 MAB21L2Q9Y586 359 aa7.47□□□□□ -1.21
LSG1-202ENST00000427461 IGKV1D-42A0A075B6H8 117 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 C11orf98E9PRG8 122 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 NPFFO15130 113 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 SURF4O15260 269 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 OR2T1O43869 369 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 OR10H3O60404 316 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 PAHP00439 452 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 DBIP07108 87 aaKnown RBP7.46□□□□□ -1.22
LSG1-202ENST00000427461 QDPRP09417 244 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 ZNF32P17041 273 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 GDI2P50395 445 aaKnown RBP7.46□□□□□ -1.22
LSG1-202ENST00000427461 ANXA11P50995 505 aaKnown RBP7.46□□□□□ -1.22
LSG1-202ENST00000427461 GNA13Q14344 377 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 PGS1Q32NB8 556 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 CD276Q5ZPR3 534 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 ZDHHC24Q6UX98 284 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 FRMD7Q6ZUT3 714 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 ANKRD46Q86W74 232 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 CREG2Q8IUH2 290 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 RIMKLAQ8IXN7 391 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 NATD1Q8N6N6 113 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 ADPRHL1Q8NDY3 354 aa7.46□□□□□ -1.22
LSG1-202ENST00000427461 OR4A15Q8NGL6 344 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms