RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 KCTD14Q9BQ13 255 aaPredicted RBP0.86□□□□□ -2.27
LINC02541-201ENST00000427157 TCHPQ9BT92 498 aa0.86□□□□□ -2.27
LINC02541-201ENST00000427157 CDHR2Q9BYE9 1310 aa0.86□□□□□ -2.27
LINC02541-201ENST00000427157 C3orf84H3BNL1 204 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 CLDN3O15551 220 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 SEC22BO75396 215 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 ZNF688P0C7X2 276 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 CALM1P0DP23 149 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 CALM2P0DP24 149 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 CALM3P0DP25 149 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 NUTF2P61970 127 aaKnown RBP0.85□□□□□ -2.27
LINC02541-201ENST00000427157 ARHGAP19Q14CB8 494 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 FILIP1LQ4L180 1135 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 ORMDL2Q53FV1 153 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 FAM222AQ5U5X8 452 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 METTL21CQ5VZV1 264 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 NT5DC3Q86UY8 548 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 ZNF101Q8IZC7 436 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 FAM49BQ9NUQ9 324 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 PIPOXQ9P0Z9 390 aa0.85□□□□□ -2.27
LINC02541-201ENST00000427157 RPAP1Q9BWH6 1393 aaPredicted RBP0.84□□□□□ -2.27
LINC02541-201ENST00000427157 PRRG1O14668 218 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 IGLV2-8P01709 118 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 IGLV3-25P01717 112 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 HSMCR30P0CW71 290 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 PAX7P23759 505 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 CDK16Q00536 496 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 RNASE13Q5GAN3 156 aaKnown RBP0.84□□□□□ -2.27
LINC02541-201ENST00000427157 ANKRD22Q5VYY1 191 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 SLC35G3Q8N808 338 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 OR2G2Q8NGZ5 317 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 HSFY1Q96LI6 401 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 TTC25Q96NG3 672 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 NPY6RQ99463 290 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 FGF23Q9GZV9 251 aaPredicted RBP0.84□□□□□ -2.27
LINC02541-201ENST00000427157 ZSCAN16Q9H4T2 348 aaPredicted RBP0.84□□□□□ -2.27
LINC02541-201ENST00000427157 C8orf17Q9NRJ1 99 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 UFSP2Q9NUQ7 469 aa0.84□□□□□ -2.27
LINC02541-201ENST00000427157 CACNA1GO43497 2377 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 CHST10O43529 356 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 EIF3GO75821 320 aaKnown RBP eCLIP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 AK1P00568 194 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 TCP1P17987 556 aaKnown RBP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 LOXP28300 417 aaPredicted RBP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 ATP5C1P36542 298 aaKnown RBP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 YAP1P46937 504 aaKnown RBP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 DUSP3P51452 185 aaPredicted RBP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 TAS2R31P59538 309 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 PPP1CBP62140 327 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 CRADDP78560 199 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 USH1GQ495M9 461 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 PTPN20Q4JDL3 420 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 USP50Q70EL3 339 aaPredicted RBP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 SNX20Q7Z614 316 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 TMEM135Q86UB9 458 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 TTLQ8NG68 377 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 MAGEE2Q8TD90 523 aaPredicted RBP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.83□□□□□ -2.28
LINC02541-201ENST00000427157 PTX4Q96A99 478 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 KRT23Q9C075 422 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 HYOU1Q9Y4L1 999 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 NACADO15069 1562 aa0.83□□□□□ -2.28
LINC02541-201ENST00000427157 KRT87PA6NCN2 255 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 TRIM64A6NGJ6 449 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 TRIM64BA6NI03 449 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 OR6C70A6NIJ9 312 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 C4orf51C9J302 202 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 FCMRO60667 390 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 REM1O75628 298 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 OR7A10O76100 309 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 AIFM1O95831 613 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 CYB5R3P00387 301 aaPredicted RBP0.82□□□□□ -2.28
LINC02541-201ENST00000427157 ZNF35P13682 527 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 FUSP35637 526 aaKnown RBP eCLIP0.82□□□□□ -2.28
LINC02541-201ENST00000427157 RGS4P49798 205 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 PPT1P50897 306 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 MPV17L2Q567V2 206 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 THEM4Q5T1C6 240 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 MORN3Q6PF18 240 aaPredicted RBP0.82□□□□□ -2.28
LINC02541-201ENST00000427157 SPNS3Q6ZMD2 512 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 MFSD9Q8NBP5 474 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 NTAN1Q96AB6 310 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 MRGPRFQ96AM1 343 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 SLC38A2Q96QD8 506 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 EXOSC4Q9NPD3 245 aaKnown RBP0.82□□□□□ -2.28
LINC02541-201ENST00000427157 PARP11Q9NR21 331 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 C21orf62Q9NYP8 219 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 EPS15L1Q9UBC2 864 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 CHRNA9Q9UGM1 479 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 TMED5Q9Y3A6 229 aa0.82□□□□□ -2.28
LINC02541-201ENST00000427157 COL22A1Q8NFW1 1626 aaPredicted RBP0.82□□□□□ -2.28
LINC02541-201ENST00000427157 ABCC9O60706 1549 aa0.81□□□□□ -2.28
LINC02541-201ENST00000427157 CCL21O00585 134 aa0.81□□□□□ -2.28
LINC02541-201ENST00000427157 CNMDO75829 334 aa0.81□□□□□ -2.28
LINC02541-201ENST00000427157 NDUFB10O96000 172 aa0.81□□□□□ -2.28
LINC02541-201ENST00000427157 LHBP01229 141 aa0.81□□□□□ -2.28
LINC02541-201ENST00000427157 ASGR1P07306 291 aa0.81□□□□□ -2.28
LINC02541-201ENST00000427157 IDH2P48735 452 aaKnown RBP0.81□□□□□ -2.28
LINC02541-201ENST00000427157 CCNG1P51959 295 aa0.81□□□□□ -2.28
LINC02541-201ENST00000427157 CDH17Q12864 832 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms