RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MED31Q9Y3C7 131 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 MMP24Q9Y5R2 645 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 DCDC2BA2VCK2 349 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ELOA3DA6NLF2 546 aaPredicted RBP10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 NPIPB9F8W1W9 429 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 GMFGO60234 142 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 PRKNO60260 465 aaPredicted RBP10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 CD74P04233 296 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 TIMP2P16035 220 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 CCKBRP32239 447 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 MRPS10P82664 201 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ELAVL2Q12926 359 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ELOA3BQ3SY89 546 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 RPL13AP3Q6NVV1 102 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 TAF8Q7Z7C8 310 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF676Q8N7Q3 588 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 FRMD1Q8N878 549 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF615Q8N8J6 731 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ELOA3Q8NG57 546 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 OR5AK2Q8NH90 309 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ATG101Q9BSB4 218 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ACTRT3Q9BYD9 372 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 SPTBN5Q9NRC6 3674 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 C7orf77A4D0Y5 90 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 EFEMP2O95967 443 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ITGB2P05107 769 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 OR2T7P0C7T2 308 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 CD79AP11912 226 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 TPT1P13693 172 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ACTC1P68032 377 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ACTA1P68133 377 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 ACTBL2Q562R1 376 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 TRAM1L1Q8N609 369 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM104Q8NE00 496 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 OR2T27Q8NH04 317 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 OR51F2Q8NH61 342 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 GPR148Q8TDV2 347 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 FOXRED1Q96CU9 486 aaPredicted RBP10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 PRSS16Q9NQE7 514 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 GSKIPQ9P0R6 139 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 MRPS33Q9Y291 106 aaKnown RBP10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 MPDZO75970 2070 aa10.23□□□□□ -0.77
SEC61A1-202ENST00000424880 A0A1W2PPC1 479 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF860A6NHJ4 632 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 H0YIZ8 118 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ATXN7O15265 892 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 WNT11O96014 354 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 EPCAMP16422 314 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 G0S2P27469 103 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 SERPINF1P36955 418 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 POLR2LP62875 67 aaKnown RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 GAS6Q14393 721 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 USF2Q15853 346 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 FCRL6Q6DN72 434 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 PAQR4Q8N4S7 273 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ACBD4Q8NC06 268 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 OR10D4PQ8NGN7 298 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 OR13C8Q8NGS7 320 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 CD300LFQ8TDQ1 290 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 FAM46BQ96A09 425 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 SEC61A2Q9H9S3 476 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM74BQ9NUR3 256 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 OR5AC2Q9NZP5 309 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 CALML5Q9NZT1 146 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 DOCK9Q9BZ29 2069 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 A0A0A6YYD5 115 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 IGKV1-8A0A0C4DH67 115 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 FGF19O95750 216 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 PLGP00747 810 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 CD8AP01732 235 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 CXCL10P02778 98 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ERCC1P07992 297 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 CCL5P13501 91 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 CSNK2A2P19784 350 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 RAB5AP20339 215 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 GPR1P46091 355 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 RPS10P46783 165 aaKnown RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 FHITP49789 147 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ACTA2P62736 377 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ACTG2P63267 376 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 SSX2Q16385 188 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 LBHQ53QV2 105 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC39A5Q6ZMH5 540 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 REC114Q7Z4M0 266 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 RANBP3LQ86VV4 465 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 LINC01555Q8NAE3 123 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 MISP3Q96FF7 219 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 MMP26Q9NRE1 261 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM100Q9NV29 134 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 KCNG2Q9UJ96 466 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 EMC8O43402 210 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ITGA3P26006 1051 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 GJA4P35212 333 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ADAM8P78325 824 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 CHAF1BQ13112 559 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 SRSF5Q13243 272 aaKnown RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ERV3-1Q14264 604 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 GAMTQ14353 236 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms