RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CCDC36Q8IYA8 594 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 ARHGAP24Q8N264 748 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 SLC22A24Q8N4F4 322 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 CLDN22Q8N7P3 220 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 ZNF540Q8NDQ6 660 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 IL17RDQ8NFM7 739 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 UBASH3BQ8TF42 649 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 RSRC1Q96IZ7 334 aaKnown RBP11.14□□□□□ -0.63
VRK3-203ENST00000424804 TSPAN32Q96QS1 320 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 RACGAP1Q9H0H5 632 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 RERGLQ9H628 205 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 TMEM38BQ9NVV0 291 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 TAS2R1Q9NYW7 299 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 MYEF2Q9P2K5 600 aaKnown RBP11.14□□□□□ -0.63
VRK3-203ENST00000424804 STX18Q9P2W9 335 aaKnown RBP11.14□□□□□ -0.63
VRK3-203ENST00000424804 GRHPRQ9UBQ7 328 aa11.14□□□□□ -0.63
VRK3-203ENST00000424804 PRPF19Q9UMS4 504 aaKnown RBP11.14□□□□□ -0.63
VRK3-203ENST00000424804 A0A1W2PPL8 197 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 UNC119BA6NIH7 251 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 GYG2O15488 501 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 SEMG1P04279 462 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 TSPAN19P0C672 248 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 OR8G3PP0DMU2 310 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 COL8A2P25067 703 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 CDAP32320 146 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 CDH15P55291 814 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 MS4A2Q01362 244 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 SNTB2Q13425 540 aaKnown RBP11.13□□□□□ -0.63
VRK3-203ENST00000424804 TRIM25Q14258 630 aaKnown RBP11.13□□□□□ -0.63
VRK3-203ENST00000424804 RAB39AQ14964 217 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 SLC16A14Q7RTX9 510 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 PIWIL3Q7Z3Z3 882 aaKnown RBP11.13□□□□□ -0.63
VRK3-203ENST00000424804 HPS1Q92902 700 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 MRPL24Q96A35 216 aaKnown RBP11.13□□□□□ -0.63
VRK3-203ENST00000424804 ZNF570Q96NI8 536 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 RBP7Q96R05 134 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 KCNN2Q9H2S1 579 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 FBXO9Q9UK97 447 aaPredicted RBP11.13□□□□□ -0.63
VRK3-203ENST00000424804 ADAM18Q9Y3Q7 739 aa11.13□□□□□ -0.63
VRK3-203ENST00000424804 A6NIZ1 184 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 XKRYO14609 159 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 WNT9BO14905 357 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 ENTPD5O75356 428 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 NDUFB2O95178 105 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 HPXP02790 462 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 NR2C1P13056 603 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 GLRXP35754 106 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 OMPP47874 163 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 CHN2P52757 468 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 RAP1BP61224 184 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 RAP1AP62834 184 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 PPP1R8Q12972 351 aaKnown RBP11.12□□□□□ -0.63
VRK3-203ENST00000424804 ANKDD1AQ495B1 522 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 MTX3Q5HYI7 312 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 LCN8Q6JVE9 175 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 TMEM53Q6P2H8 277 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 LINC01356Q8N9X3 169 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 LRRC75AQ8NAA5 344 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 YIPF5Q969M3 257 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 RASD2Q96D21 266 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 Q96M85 177 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 SNX18Q96RF0 628 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 MRPL13Q9BYD1 178 aaKnown RBP11.12□□□□□ -0.63
VRK3-203ENST00000424804 OR51B6Q9H340 312 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 MUC13Q9H3R2 512 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 TPK1Q9H3S4 243 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 DENND2DQ9H6A0 471 aaPredicted RBP11.12□□□□□ -0.63
VRK3-203ENST00000424804 CCNB1IP1Q9NPC3 277 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 IL1RAPQ9NPH3 570 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 CMAHPQ9Y471 501 aa11.12□□□□□ -0.63
VRK3-203ENST00000424804 IGKV1D-43A0A0B4J1Z2 117 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 TEX13CA0A0J9YWL9 993 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 TCRBV5S2A0A599 114 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 CENPBD1B2RD01 187 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 TNFRSF11BO00300 401 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 SOCS2O14508 198 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 IGHMP01871 453 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 CD14P08571 375 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 APEX1P27695 318 aaKnown RBP11.11□□□□□ -0.63
VRK3-203ENST00000424804 GUCA1AP43080 201 aaPredicted RBP11.11□□□□□ -0.63
VRK3-203ENST00000424804 ERFP50548 548 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 GALK2Q01415 458 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 FHL1Q13642 323 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 HIST3H3Q16695 136 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 SLC36A2Q495M3 483 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 DNAL1Q4LDG9 190 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 FAM98BQ52LJ0 330 aaKnown RBP11.11□□□□□ -0.63
VRK3-203ENST00000424804 FAM205BPQ63HN1 556 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 FANK1Q8TC84 345 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 ASB9Q96DX5 294 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 DHRS1Q96LJ7 313 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 ALG12Q9BV10 488 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 TRIM15Q9C019 465 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 C1orf21Q9H246 121 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 REV1Q9UBZ9 1251 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 TMEFF2Q9UIK5 374 aaPredicted RBP11.11□□□□□ -0.63
VRK3-203ENST00000424804 SIGLEC7Q9Y286 467 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 IER3IP1Q9Y5U9 82 aa11.11□□□□□ -0.63
VRK3-203ENST00000424804 IQCMA0A1B0GVH7 501 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 NPIPB13A6NJU9 1138 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms