RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 GIFP27352 417 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 SFTPDP35247 375 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 FRKP42685 505 aaPredicted RBP3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 MAGEA4P43358 317 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 KRT6CP48668 564 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 AMTP48728 403 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 ENTPD1P49961 510 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 HTR6P50406 440 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 NCBP2P52298 156 aaKnown RBP eCLIP3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 CAPZA1P52907 286 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 SNRPEP62304 92 aaKnown RBP3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF117Q03924 483 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 CHRNB3Q05901 458 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF763Q0D2J5 394 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 RASGEF1BQ0VAM2 473 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 HSPB3Q12988 150 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 CALCOCO2Q13137 446 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 UBE2V1Q13404 147 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 GGTLC2Q14390 218 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 STK11Q15831 433 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 GABRA6Q16445 453 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 TMEM176BQ3YBM2 270 aaPredicted RBP3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 VPS26BQ4G0F5 336 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 UNC50Q53HI1 259 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 FBXW9Q5XUX1 488 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZCCHC12Q6PEW1 402 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 SHQ1Q6PI26 577 aaKnown RBP3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 Q6ZTK2 550 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 MSANTD1Q6ZTZ1 278 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 MTERF4Q7Z6M4 381 aaKnown RBP3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 CDRT4Q8N9R6 151 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 WDR31Q8NA23 367 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF540Q8NDQ6 660 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 OR5R1Q8NH85 324 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 FAM76AQ8TAV0 307 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 FBXO25Q8TCJ0 367 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 GPR119Q8TDV5 335 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZFP90Q8TF47 636 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 PIK3R3Q92569 461 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 FOXN4Q96NZ1 517 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 ZNF300Q96RE9 604 aaPredicted RBP3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 MRPL57Q9BQC6 102 aaKnown RBP3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 FUT8Q9BYC5 575 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 UBQLN4Q9NRR5 601 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 C1RLQ9NZP8 487 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 SENP1Q9P0U3 644 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 MALT1Q9UDY8 824 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 SNX5Q9Y5X3 404 aa3.97□□□□□ -1.77
CDC42EP3-202ENST00000422687 IGHV3-15A0A0B4J1V0 119 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 A0A0U1RQK1 487 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 ZNF320A2RRD8 509 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 A4D1N5 150 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 SERINC4A6NH21 518 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 ZNF716A6NP11 495 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 H0YAE9 185 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GMFGO60234 142 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 KIAA0513O60268 411 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 SMIM24O75264 130 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 PDE5AO76074 875 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GAGE7O76087 117 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 H6PDO95479 791 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GAGE12FP0CL80 117 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GAGE12GP0CL81 117 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GAGE12IP0CL82 117 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 TSPAN8P19075 237 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 NTSP30990 170 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 RFX3P48380 749 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 KHKP50053 298 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 ZNF83P51522 516 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 P2RX1P51575 399 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 DVL1P1P54792 670 aaPredicted RBP3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 FOXG1P55316 489 aaPredicted RBP3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 PKNOX1P55347 436 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 MRPS25P82663 173 aaKnown RBP3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 ROR2Q01974 943 aaKnown RBP3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 CAV1Q03135 178 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 C2orf80Q0P641 193 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GAGE1Q13065 139 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GAGE4Q13068 117 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 SELENBP1Q13228 472 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 KIAA0040Q15053 153 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 TOMM34Q15785 309 aaPredicted RBP3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 DUSP5Q16690 384 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 PDLIM3Q53GG5 364 aaPredicted RBP3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 ZNF678Q5SXM1 525 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 AP1ARQ63HQ0 302 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 ZNF626Q68DY1 528 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 OR7E24Q6IFN5 339 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 CBLN3Q6UW01 205 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GPRIN3Q6ZVF9 776 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 USP43Q70EL4 1123 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 C17orf78Q8N4C9 275 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GATSQ8NAP1 163 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 OR52N5Q8NH56 324 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 OCC1Q8TAD7 63 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 GPR151Q8TDV0 419 aa3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 NTN5Q8WTR8 489 aaPredicted RBP3.96□□□□□ -1.78
CDC42EP3-202ENST00000422687 SLC25A28Q96A46 364 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms