RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 NTNG1Q9Y2I2 539 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 PTRH2Q9Y3E5 179 aaKnown RBP11.34□□□□□ -0.59
CLCN4-203ENST00000421085 A0A087WV62 115 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 PLSCR5A0PG75 271 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 CEBPBP17676 345 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 C5orf46Q6UWT4 87 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 SEMA6DQ8NFY4 1073 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 GNG12Q9UBI6 72 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 PIGLQ9Y2B2 252 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 STRAPQ9Y3F4 350 aaKnown RBP11.34□□□□□ -0.59
CLCN4-203ENST00000421085 F6UZH7 168 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 HMGN4O00479 90 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 TRAF3IP2O43734 574 aaPredicted RBP11.34□□□□□ -0.59
CLCN4-203ENST00000421085 MBP02144 154 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 AKR1C3P42330 323 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 OR2L13Q8N349 312 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 MFSD4AQ8N468 514 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 NARFLQ9H6Q4 476 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 TNFRSF12AQ9NP84 129 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 CHRNA9Q9UGM1 479 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 PADI1Q9ULC6 663 aa11.34□□□□□ -0.59
CLCN4-203ENST00000421085 PHOX2AO14813 284 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 EDIL3O43854 480 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 MRPL33O75394 65 aaKnown RBP11.33□□□□□ -0.6
CLCN4-203ENST00000421085 ZFAND5O76080 213 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 ACSM4P0C7M7 580 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 OR8U8P0C7N1 319 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 GLI4P10075 376 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 RPL12P30050 165 aaKnown RBP11.33□□□□□ -0.6
CLCN4-203ENST00000421085 WDR88Q6ZMY6 472 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 KLHDC9Q8NEP7 349 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 OR1J2Q8NGS2 313 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 IKZF5Q9H5V7 419 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 GAR1Q9NY12 217 aaKnown RBP11.33□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF727A8MUV8 499 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 PLPP1O14494 284 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 ARRB2P32121 409 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 OR2T2Q6IF00 324 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 LCN15Q6UWW0 184 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 TMEM64Q6YI46 380 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 CA14Q9ULX7 337 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 COA3Q9Y2R0 106 aaPredicted RBP11.33□□□□□ -0.6
CLCN4-203ENST00000421085 A8MVM7 634 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 CNMDO75829 334 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 SLCO2B1O94956 709 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 OR10J4P0C629 311 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 NTF3P20783 257 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 TNFSF4P23510 183 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 P2RX1P51575 399 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 H3F3AP84243 136 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 VAMP3Q15836 100 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 BTNL8Q6UX41 500 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 ALKAL1Q6UXT8 129 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 SEH1LQ96EE3 360 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 WDR89Q96FK6 387 aaPredicted RBP11.33□□□□□ -0.6
CLCN4-203ENST00000421085 TOLLIPQ9H0E2 274 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 RAB27BO00194 218 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF217O75362 1048 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 CD3DP04234 171 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 HNF1AP20823 631 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 CLLU1Q5K131 121 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 PRSS36Q5K4E3 855 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF2Q9BSG1 426 aaPredicted RBP11.33□□□□□ -0.6
CLCN4-203ENST00000421085 CABLES2Q9BTV7 478 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 ADAMTS5Q9UNA0 930 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 SLC2A1P11166 492 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 EPHA2P29317 976 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 FBXW5Q969U6 566 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 CASD1Q96PB1 797 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 KCNJ15Q99712 375 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 HEYLQ9NQ87 328 aaPredicted RBP11.33□□□□□ -0.6
CLCN4-203ENST00000421085 SRPK3Q9UPE1 567 aa11.33□□□□□ -0.6
CLCN4-203ENST00000421085 TMEM189-UBE2V1I3L0A0 370 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 HCRTR1O43613 425 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 CTNSO60931 367 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 DCTDP32321 178 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 BCL6P41182 706 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 ARG2P78540 354 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 TGFBR3Q03167 851 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF90Q03938 601 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 DOC2BQ14184 412 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 CCDC190Q86UF4 302 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 SIGLECL1Q8N7X8 197 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 BPIFCQ8NFQ6 507 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 OR14A16Q8NHC5 309 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 ARHGAP9Q9BRR9 750 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 MED18Q9BUE0 208 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 C8orf33Q9H7E9 229 aaPredicted RBP11.32□□□□□ -0.6
CLCN4-203ENST00000421085 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLCN4-203ENST00000421085 S100A7AQ86SG5 101 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 OR4F5Q8NH21 305 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 KIRREL1Q96J84 757 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 DCBLD2Q96PD2 775 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 OR4F4Q96R69 305 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 P2RY12Q9H244 342 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 TM7SF3Q9NS93 570 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 WSB2Q9NYS7 404 aaPredicted RBP11.32□□□□□ -0.6
CLCN4-203ENST00000421085 SH3BGRL2Q9UJC5 107 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 PNPP00491 289 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms