RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 MT-ND4LP03901 98 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 HNRNPA1P09651 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 CD1CP29017 333 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ACTBP60709 375 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ACTG1P63261 375 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 IRF4Q15306 451 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ELOA3BQ3SY89 546 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 DHRS11Q6UWP2 260 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMPRSS11FQ6ZWK6 438 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF547Q8IVP9 402 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 RNF113BQ8IZP6 322 aaKnown RBP13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ELOA3Q8NG57 546 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR7G2Q8NG99 324 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR5K2Q8NHB8 316 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 SECTM1Q8WVN6 248 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 SLAMF9Q96A28 289 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 PIGQQ9BRB3 760 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 C1orf198Q9H425 327 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 FN3KRPQ9HA64 309 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 SDHAF3Q9NRP4 125 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 C17orf113A0A1B0GUU1 675 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 C4orf47A7E2U8 309 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF736B4DX44 427 aaPredicted RBP13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 MCIDASD6RGH6 385 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 AP4M1O00189 453 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 PHYHO14832 338 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 LAP3P28838 519 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 VASPP50552 380 aaPredicted RBP13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 SEC13P55735 322 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 CXADRP78310 365 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 ID2Q02363 134 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 MST1LQ2TV78 715 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 EIPR1Q53HC9 387 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 OTPQ5XKR4 325 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 IL34Q6ZMJ4 242 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 ABHD13Q7L211 337 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 PPP1R3BQ86XI6 285 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF761Q86XN6 746 aaPredicted RBP13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 RASD2Q96D21 266 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 ADAD1Q96M93 576 aaKnown RBP13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 SLC25A21Q9BQT8 299 aaPredicted RBP13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 CST11Q9H112 138 aa13.33□□□□□ -0.27
NCKIPSD-204ENST00000416649 RCC1P18754 421 aaPredicted RBP13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 AGAP20933 346 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 HIST1H1TP22492 207 aaPredicted RBP13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 HSD17B2P37059 387 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 REEP5Q00765 189 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 C2orf76Q3KRA6 126 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 TSEN15Q8WW01 171 aaKnown RBP13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 ASB16Q96NS5 453 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 PLA2G2FQ9BZM2 168 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 SYT4Q9H2B2 425 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 LPAR3Q9UBY5 353 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 FITM1A5D6W6 292 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 DUXAA6NLW8 204 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 FBXO24O75426 580 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 ADH1CP00326 375 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 ACKR3P25106 362 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 CAV2P51636 162 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 LPCAT3Q6P1A2 487 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 NUDCD2Q8WVJ2 157 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 ROBO4Q8WZ75 1007 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 SLC6A7Q99884 636 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 FRRS1LQ9P0K9 344 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 SLC23A2Q9UGH3 650 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 MSRAQ9UJ68 235 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 COL4A3Q01955 1670 aa13.33□□□□□ -0.28
NCKIPSD-204ENST00000416649 TRBV23OR9-2A0A075B6M9 112 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 CXorf65A6NEN9 183 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 URADA6NGE7 173 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 ITGA5P08648 1049 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 CISD3P0C7P0 127 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 NDUFB7P17568 137 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 RAB5AP20339 215 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 PSMB6P28072 239 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 EEF1A1P68104 462 aaKnown RBP13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 CSNK1G2P78368 415 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 CDNFQ49AH0 187 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 AWAT1Q58HT5 328 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 PYY3Q5JQD4 70 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 MFSD12Q6NUT3 480 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 PLPP7Q8NBV4 271 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 GTF3AQ92664 365 aaKnown RBP13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 RAB3CQ96E17 227 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 RRNAD1Q96FB5 475 aaKnown RBP13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 PHB2Q99623 299 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 PELI2Q9HAT8 420 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 VSIG4Q9Y279 399 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 TMED7Q9Y3B3 224 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 NUP210Q8TEM1 1887 aaPredicted RBP13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 CDC40O60508 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 SRPX2O60687 465 aaPredicted RBP13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 LRP3O75074 770 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 LPAR6P43657 344 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 DIO1P49895 249 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 SLC48A1Q6P1K1 146 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 TTLL10Q6ZVT0 673 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 FOXRED2Q8IWF2 684 aa13.32□□□□□ -0.28
NCKIPSD-204ENST00000416649 SLC30A7Q8NEW0 376 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms