RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 SQSTM1Q13501 440 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 RAB11BQ15907 218 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 LAMTOR1Q6IAA8 161 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 FGD2Q7Z6J4 655 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 PPP1R3BQ86XI6 285 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 CATSPERDQ86XM0 798 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 OR11G2Q8NGC1 345 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 OR51D1Q8NGF3 324 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 SAP25Q8TEE9 199 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 OR10A4Q9H209 315 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 METTL7AQ9H8H3 244 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 APMAPQ9HDC9 416 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 ZNF275Q9NSD4 429 aaPredicted RBP11.09□□□□□ -0.63
UBA3-203ENST00000415609 MED29Q9NX70 200 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 HRH3Q9Y5N1 445 aa11.09□□□□□ -0.63
UBA3-203ENST00000415609 TRIOBPQ9H2D6 2365 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 ZNF208O43345 1280 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 OR2J2O76002 312 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 ZFAND5O76080 213 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 CD2P06729 351 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 DCTDP32321 178 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 POU3F4P49335 361 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 VEGFCP49767 419 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 HLA-BQ31612 363 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 ELFN2Q5R3F8 820 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 PHF19Q5T6S3 580 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 LCN10Q6JVE6 187 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 FAAP20Q6NZ36 180 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 DCXRQ7Z4W1 244 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 LINC00346Q8IVM7 164 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 TTC9Q92623 222 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 SPSB2Q99619 263 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 KCNK15Q9H427 330 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 CKLFQ9UBR5 152 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 FBXL3Q9UKT7 428 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 EMC9Q9Y3B6 208 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 CACNA1CQ13936 2221 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 CACNA1EQ15878 2313 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 ARPC1BO15143 372 aaKnown RBP11.08□□□□□ -0.64
UBA3-203ENST00000415609 XRCC3O43542 346 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 ITGA5P08648 1049 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 NAGAP17050 411 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 CSRP1P21291 193 aaKnown RBP11.08□□□□□ -0.64
UBA3-203ENST00000415609 EFNB2P52799 333 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 ANGPT1Q15389 498 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 ZNF385CQ66K41 422 aaPredicted RBP11.08□□□□□ -0.64
UBA3-203ENST00000415609 OLFML2AQ68BL7 652 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 TMEM225Q6GV28 225 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 WDFY1Q8IWB7 410 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 C9orf62Q8N4C0 152 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 OR10G3Q8NGC4 313 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 ZNF431Q8TF32 576 aaPredicted RBP11.08□□□□□ -0.64
UBA3-203ENST00000415609 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 NKX3-1Q99801 234 aaPredicted RBP11.08□□□□□ -0.64
UBA3-203ENST00000415609 RANBP3Q9H6Z4 567 aaPredicted RBP11.08□□□□□ -0.64
UBA3-203ENST00000415609 ALKBH4Q9NXW9 302 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 MYOTQ9UBF9 498 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 C19orf25Q9UFG5 118 aaPredicted RBP11.08□□□□□ -0.64
UBA3-203ENST00000415609 R4GMQ9 66 aa11.08□□□□□ -0.64
UBA3-203ENST00000415609 GGT3PA6NGU5 568 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 LIPT2A6NK58 231 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 DOK2O60496 412 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 TSC22D2O75157 780 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 CTAG2O75638 210 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 SULT1A3P0DMM9 295 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 SULT1A4P0DMN0 295 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 FOSL2P15408 326 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 PMS2CLQ68D20 193 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 ANKRD16Q6P6B7 361 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 CDH24Q86UP0 819 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 OR13C3Q8NGS6 347 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 SLC22A8Q8TCC7 542 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 ASB5Q8WWX0 329 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 FAM3DQ96BQ1 224 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 CMKLR1Q99788 373 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 DIABLOQ9NR28 239 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 TAS2R4Q9NYW5 299 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 MGAT4AQ9UM21 535 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 WIF1Q9Y5W5 379 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 ADAMTS9Q9P2N4 1935 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 ASCC3Q8N3C0 2202 aaKnown RBP11.07□□□□□ -0.64
UBA3-203ENST00000415609 FREM3P0C091 2139 aa11.07□□□□□ -0.64
UBA3-203ENST00000415609 IGKV1D-43A0A0B4J1Z2 117 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 LOC100289279A0A1B0GTE1 492 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 SLC17A2O00624 439 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 EIF1AYO14602 144 aaKnown RBP11.06□□□□□ -0.64
UBA3-203ENST00000415609 PRAF2O60831 178 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 HPXP02790 462 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 CFIP05156 583 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 CFPP27918 469 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 MSX1P28360 303 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 PTGS2P35354 604 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 DNASE1L1P49184 302 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 BIDP55957 195 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 PLPPR5Q32ZL2 321 aa11.06□□□□□ -0.64
UBA3-203ENST00000415609 C2orf76Q3KRA6 126 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms