RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 NANOGQ9H9S0 305 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 NTN4Q9HB63 628 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 MSL2Q9HCI7 577 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 OPN4Q9UHM6 478 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 SH3GLB1Q9Y371 365 aa16.38■□□□□ 0.21
UBXN4-202ENST00000415164 LOC100509620A0A075B734 347 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 TIMM8AO60220 97 aaPredicted RBP16.37■□□□□ 0.21
UBXN4-202ENST00000415164 MT-ND1P03886 318 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 TNFRSF1BP20333 461 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 RBMXP38159 391 aaKnown RBP16.37■□□□□ 0.21
UBXN4-202ENST00000415164 MMP15P51511 669 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 MRPS34P82930 218 aaKnown RBP16.37■□□□□ 0.21
UBXN4-202ENST00000415164 TAF11Q15544 211 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 TMEM255AQ5JRV8 349 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 INTS11Q5TA45 600 aaKnown RBP16.37■□□□□ 0.21
UBXN4-202ENST00000415164 RFPL4BQ6ZWI9 263 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 SLC30A8Q8IWU4 369 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 KLF14Q8TD94 323 aaPredicted RBP16.37■□□□□ 0.21
UBXN4-202ENST00000415164 HDAC2Q92769 488 aaKnown RBP16.37■□□□□ 0.21
UBXN4-202ENST00000415164 MARS2Q96GW9 593 aaKnown RBP16.37■□□□□ 0.21
UBXN4-202ENST00000415164 POM121L2Q96KW2 1035 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 PRSS27Q9BQR3 290 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 RABEP2Q9H5N1 569 aa16.37■□□□□ 0.21
UBXN4-202ENST00000415164 IGKV1D-43A0A0B4J1Z2 117 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 A0A1W2PPL8 197 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 FOXH1O75593 365 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 UBOX5O94941 541 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 ZFP36P26651 326 aaKnown RBP16.36■□□□□ 0.21
UBXN4-202ENST00000415164 PCGF2P35227 344 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 PPP1CBP62140 327 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 TNFAIP6P98066 277 aaPredicted RBP16.36■□□□□ 0.21
UBXN4-202ENST00000415164 PSG4Q00888 419 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 FOXL1Q12952 345 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 SPRNQ5BIV9 151 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 C10orf128Q5T292 105 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 ZNF426Q9BUY5 554 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 CYSLTR2Q9NS75 346 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 C20orf141Q9NUB4 165 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 DCAF16Q9NXF7 216 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 STX18Q9P2W9 335 aaKnown RBP16.36■□□□□ 0.21
UBXN4-202ENST00000415164 UGT2A1Q9Y4X1 527 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 NPTNQ9Y639 398 aa16.36■□□□□ 0.21
UBXN4-202ENST00000415164 CENPBD1B2RD01 187 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 TMPRSS2O15393 492 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 MGRN1O60291 552 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 LAP3P28838 519 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 GUCA1AP43080 201 aaPredicted RBP16.35■□□□□ 0.21
UBXN4-202ENST00000415164 ARHGDIAP52565 204 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 LAPTM4AQ15012 233 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 MBNL2Q5VZF2 373 aaKnown RBP16.35■□□□□ 0.21
UBXN4-202ENST00000415164 ALDH16A1Q8IZ83 802 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 TMEM239Q8WW34 195 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 RASSF5Q8WWW0 418 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 NABP1Q96AH0 204 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 KAT8Q9H7Z6 458 aaKnown RBP16.35■□□□□ 0.21
UBXN4-202ENST00000415164 EGFL7Q9UHF1 273 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 MEGF8Q7Z7M0 2845 aa16.35■□□□□ 0.21
UBXN4-202ENST00000415164 PIP5K1CO60331 668 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 ERLIN1O75477 346 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 NGFP01138 241 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 NR2C1P13056 603 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 BAMBIQ13145 260 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 VMACQ2NL98 169 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 ZMAT1Q5H9K5 638 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 ARMC4Q5T2S8 1044 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 ZNF774Q6NX45 483 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 SHISA2Q6UWI4 295 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 CLDN22Q8N7P3 220 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 SEPHS2Q99611 448 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 ZNF747Q9BV97 191 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 OR2H1Q9GZK4 316 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 PCDHAC1Q9H158 963 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 WNT5BQ9H1J7 359 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 NPHS2Q9NP85 383 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 MMP26Q9NRE1 261 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 ZNF69Q9UC07 566 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 RIMS3Q9UJD0 308 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 PURGQ9UJV8 347 aaKnown RBP16.34■□□□□ 0.21
UBXN4-202ENST00000415164 ZDHHC8Q9ULC8 765 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 AUP1Q9Y679 476 aa16.34■□□□□ 0.21
UBXN4-202ENST00000415164 DNAJC9-AS1A6NH13 148 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 FSHBP01225 129 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 HKR1P10072 659 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 LIPAP38571 399 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 RBM34P42696 430 aaKnown RBP16.33■□□□□ 0.2
UBXN4-202ENST00000415164 PIN1Q13526 163 aaPredicted RBP16.33■□□□□ 0.2
UBXN4-202ENST00000415164 ALG10Q5BKT4 473 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 MTX3Q5HYI7 312 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 IGFN1Q86VF2 1251 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 KLHL36Q8N4N3 616 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 DPP10Q8N608 796 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 DVL3Q92997 716 aaPredicted RBP16.33■□□□□ 0.2
UBXN4-202ENST00000415164 RBP7Q96R05 134 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 DIRC2Q96SL1 478 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 TXNIPQ9H3M7 391 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 SMURF2Q9HAU4 748 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 ELOVL3Q9HB03 270 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 NUP50Q9UKX7 468 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 MED31Q9Y3C7 131 aa16.33■□□□□ 0.2
UBXN4-202ENST00000415164 MGAM2Q2M2H8 2515 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms