RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ALKBH3Q96Q83 286 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 AMELYQ99218 206 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 MYCBPQ99417 103 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 BCL7BQ9BQE9 202 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 TTYH2Q9BSA4 534 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 GP6Q9HCN6 339 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 TRIM36Q9NQ86 728 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 POLE4Q9NR33 117 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ACOXLQ9NUZ1 547 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 LAMP5Q9UJQ1 280 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 GNG8Q9UK08 70 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 CLEC4AQ9UMR7 237 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 NOSIPQ9Y314 301 aaKnown RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 TMEM14AQ9Y6G1 99 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 MGAQ8IWI9 3026 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 URB1O60287 2271 aaKnown RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 ZNF407Q9C0G0 2248 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 CHD8Q9HCK8 2581 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 PNMA8CA0A1B0GUJ8 204 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 TRIM64BA6NI03 449 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 HSPB2A8KAH6 182 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 E9PI62 339 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 J3QLW9 94 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 MAGEB4O15481 346 aaPredicted RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 DHHO43323 396 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 MRPL33O75394 65 aaKnown RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 KRT8P05787 483 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 YES1P07947 543 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 OR8G3PP0DMU2 310 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 ZNF823P16415 610 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 ZNF19P17023 458 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 MSR1P21757 451 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 NR4A1P22736 598 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 GADD45AP24522 165 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 GABRA5P31644 462 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 CDAP32320 146 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 ZNF84P51523 738 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 TDGF1P3P51864 188 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 PRSS12P56730 875 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 TAS2R43P59537 309 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 ROM1Q03395 351 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 AQP6Q13520 282 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 TPBGQ13641 420 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 EIF2B1Q14232 305 aaKnown RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 GUSBP1Q15486 140 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 HSPB2Q16082 182 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 KCNMB1Q16558 191 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 CTF1Q16619 201 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 CNPY1Q3B7I2 92 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 RIPPLY2Q5TAB7 128 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 RPTNQ6XPR3 784 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 LINGO2Q7L985 606 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 FAM220AQ7Z4H9 259 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 P4HA3Q7Z4N8 544 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 LINC00346Q8IVM7 164 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 GPR137CQ8N3F9 429 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 ZFP41Q8N8Y5 198 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 KDF1Q8NAX2 398 aaPredicted RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 OR5M9Q8NGP3 310 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 OR52N5Q8NH56 324 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 CPT1CQ8TCG5 803 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 ST7LQ8TDW4 575 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 HTRA1Q92743 480 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 RPL3LQ92901 407 aaKnown RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 NABP1Q96AH0 204 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 APH1AQ96BI3 265 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 PELI1Q96FA3 418 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 GMPPAQ96IJ6 420 aaPredicted RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 OR8B4Q96RC9 309 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 TRIB1Q96RU8 372 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 SLX1AQ9BQ83 275 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 ABHD6Q9BV23 337 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 LINC00470Q9BZP3 86 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 SLCO5A1Q9H2Y9 848 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 NELFAQ9H3P2 528 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 PRORYQ9H606 182 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 SEC61A2Q9H9S3 476 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 CALHM2Q9HA72 323 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 CRLF2Q9HC73 371 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 GPR35Q9HC97 309 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 EMC7Q9NPA0 242 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 B3GAT2Q9NPZ5 323 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 NPDC1Q9NQX5 325 aaPredicted RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 PARPBPQ9NWS1 579 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 BABAM2Q9NXR7 383 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 CYB5R1Q9UHQ9 305 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 MRM2Q9UI43 246 aaKnown RBP5.87□□□□□ -1.47
VPS41-204ENST00000413141 ST6GALNAC2Q9UJ37 374 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 POLR1DQ9Y2S0 133 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 GRIP1Q9Y3R0 1128 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 LHFPL6Q9Y693 200 aa5.87□□□□□ -1.47
VPS41-204ENST00000413141 METTL15A6NJ78 407 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 OR6C65A6NJZ3 312 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 AHRRA9YTQ3 701 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 PSMD9O00233 223 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 SLC22A1O15245 554 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 LRRTM2O43300 516 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 AIREO43918 545 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 SULT1C4O75897 302 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms