RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 DOK1Q99704 481 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 MRPL37Q9BZE1 423 aaKnown RBP16.24■□□□□ 0.19
TRIM56-202ENST00000412507 OR52D1Q9H346 318 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 C1orf198Q9H425 327 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 MAGIXQ9H6Y5 334 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 SLC7A8Q9UHI5 535 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 IGHV4-30-2A0A087WSY4 118 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 FAM171A2A8MVW0 826 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 TNFRSF11BO00300 401 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 IMPA2O14732 288 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 AHCYL1O43865 530 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 KRT36O76013 467 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 PPP1R3DO95685 299 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 F12P00748 615 aaPredicted RBP16.23■□□□□ 0.19
TRIM56-202ENST00000412507 HEXAP06865 529 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 CST2P09228 141 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 FPR3P25089 353 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 IFNGR2P38484 337 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 GSSP48637 474 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 PPOXP50336 477 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 RPS6KA3P51812 740 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 PPP1R8Q12972 351 aaKnown RBP16.23■□□□□ 0.19
TRIM56-202ENST00000412507 TBC1D28Q2M2D7 210 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 C1orf94Q6P1W5 598 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 PGBD2Q6P3X8 592 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 PTCHD4Q6ZW05 846 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 CPEB3Q8NE35 698 aaKnown RBP16.23■□□□□ 0.19
TRIM56-202ENST00000412507 OR1J2Q8NGS2 313 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 AKR7LQ8NHP1 331 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 GNPDA2Q8TDQ7 276 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 MRPL24Q96A35 216 aaKnown RBP16.23■□□□□ 0.19
TRIM56-202ENST00000412507 LRGUKQ96M69 825 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 FOXN4Q96NZ1 517 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 ZNF416Q9BWM5 594 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 OR51B6Q9H340 312 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 POLE4Q9NR33 117 aa16.23■□□□□ 0.19
TRIM56-202ENST00000412507 TXNDC12O95881 172 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 FAM157BP0CG42 384 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 CTLA4P16410 223 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 MSR1P21757 451 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 APLNRP35414 380 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 HMGA2P52926 109 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 RPS23P62266 143 aaKnown RBP16.22■□□□□ 0.19
TRIM56-202ENST00000412507 PSG4Q00888 419 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 ENDOGQ14249 297 aaKnown RBP16.22■□□□□ 0.19
TRIM56-202ENST00000412507 RFX4Q33E94 735 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 FAM98BQ52LJ0 330 aaKnown RBP16.22■□□□□ 0.19
TRIM56-202ENST00000412507 LRP11Q86VZ4 500 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 ZCCHC24Q8N2G6 241 aaKnown RBP16.22■□□□□ 0.19
TRIM56-202ENST00000412507 OR10H5Q8NGA6 315 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 OR9Q2Q8NGE9 314 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 FAM168AQ92567 244 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 SAMD8Q96LT4 415 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 ERMAPQ96PL5 475 aaPredicted RBP16.22■□□□□ 0.19
TRIM56-202ENST00000412507 SYT3Q9BQG1 590 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 SYT4Q9H2B2 425 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 RERGLQ9H628 205 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 EMC7Q9NPA0 242 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 VSX1Q9NZR4 365 aaPredicted RBP16.22■□□□□ 0.19
TRIM56-202ENST00000412507 FZR1Q9UM11 496 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 FKBP7Q9Y680 259 aa16.22■□□□□ 0.19
TRIM56-202ENST00000412507 ACOT8O14734 319 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 GYG2O15488 501 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 SLC16A7O60669 478 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 STAMBPO95630 424 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 SNAP29O95721 258 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 CCNOP22674 350 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 STOMP27105 288 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 SLC6A6P31641 620 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 CDKN2AP42771 156 aaKnown RBP16.21■□□□□ 0.19
TRIM56-202ENST00000412507 DSCR9P59020 149 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 TRAP1Q12931 704 aaKnown RBP16.21■□□□□ 0.19
TRIM56-202ENST00000412507 TSPAN31Q12999 210 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 UGT2A3Q6UWM9 527 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 ADCK1Q86TW2 530 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 OR4C15Q8NGM1 316 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 SLC7A6OSQ96CW6 309 aaPredicted RBP16.21■□□□□ 0.19
TRIM56-202ENST00000412507 BTBD10Q9BSF8 475 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 TRIM15Q9C019 465 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 OR2H1Q9GZK4 316 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 RAB1BQ9H0U4 201 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 WNT5BQ9H1J7 359 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 LRMDAQ9H2I8 198 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 DYNLRB1Q9NP97 96 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 VNN3Q9NY84 501 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 MYEF2Q9P2K5 600 aaKnown RBP16.21■□□□□ 0.19
TRIM56-202ENST00000412507 FBXO9Q9UK97 447 aaPredicted RBP16.21■□□□□ 0.19
TRIM56-202ENST00000412507 FN1P02751 2386 aaKnown RBP16.21■□□□□ 0.19
TRIM56-202ENST00000412507 NAV3Q8IVL0 2385 aa16.21■□□□□ 0.19
TRIM56-202ENST00000412507 HIVEP2P31629 2446 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 KHDRBS3O75525 346 aaKnown RBP16.2■□□□□ 0.18
TRIM56-202ENST00000412507 CCNB2O95067 398 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 IGFBP1P08833 259 aaPredicted RBP16.2■□□□□ 0.18
TRIM56-202ENST00000412507 ADRA2AP08913 450 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 APEHP13798 732 aaKnown RBP16.2■□□□□ 0.18
TRIM56-202ENST00000412507 EVX1P49640 407 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 PCBD1P61457 104 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 DNAL1Q4LDG9 190 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 OTPQ5XKR4 325 aa16.2■□□□□ 0.18
TRIM56-202ENST00000412507 OR2T5Q6IEZ7 315 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms