RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 PAX1P15863 534 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 ZNF32P17041 273 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 MSR1P21757 451 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 FASP25445 335 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 NKX6-1P78426 367 aaPredicted RBP11.4□□□□□ -0.58
HDAC8-210ENST00000412342 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.4□□□□□ -0.58
HDAC8-210ENST00000412342 SGCAQ16586 387 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 SLC36A3Q495N2 470 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 SLC35F1Q5T1Q4 408 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 C11orf71Q6IPW1 123 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 UGT2A3Q6UWM9 527 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 ZBTB46Q86UZ6 589 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 OR6V1Q8N148 313 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 NUP37Q8NFH4 326 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 OR5K1Q8NHB7 308 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 LRTOMTQ8WZ04 291 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 PIGTQ969N2 578 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 FOXN4Q96NZ1 517 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 TRAF4Q9BUZ4 470 aaPredicted RBP11.4□□□□□ -0.58
HDAC8-210ENST00000412342 ZNF416Q9BWM5 594 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 GRIP2Q9C0E4 1043 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 RACGAP1Q9H0H5 632 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 FN3KQ9H479 309 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 EMC7Q9NPA0 242 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 FBXL3Q9UKT7 428 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 EDARQ9UNE0 448 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 B9D1Q9UPM9 204 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 COA3Q9Y2R0 106 aaPredicted RBP11.4□□□□□ -0.58
HDAC8-210ENST00000412342 VPS13CQ709C8 3753 aa11.4□□□□□ -0.58
HDAC8-210ENST00000412342 TMCC2O75069 709 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 GPANK1O95872 356 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 FCGR1AP12314 374 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 TTKP33981 857 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 DAPP51397 102 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 ART1P52961 327 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 PSG4Q00888 419 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 KCNMB1Q16558 191 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 OTPQ5XKR4 325 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 ZNF544Q6NX49 715 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 TMEM53Q6P2H8 277 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 AMIGO2Q86SJ2 522 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 JAZF1Q86VZ6 243 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 GLB1L2Q8IW92 636 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 DEPDC4Q8N2C3 294 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 PAQR4Q8N4S7 273 aaPredicted RBP11.39□□□□□ -0.59
HDAC8-210ENST00000412342 IQCF1Q8N6M8 205 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 CPEB3Q8NE35 698 aaKnown RBP11.39□□□□□ -0.59
HDAC8-210ENST00000412342 IL17RDQ8NFM7 739 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 OR2T33Q8NG76 320 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 OR52E2Q8NGJ4 325 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 PYDC1Q8WXC3 89 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 RBM4Q9BWF3 364 aaKnown RBP11.39□□□□□ -0.59
HDAC8-210ENST00000412342 NMNAT2Q9BZQ4 307 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 GABARAPL1Q9H0R8 117 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 WNT5BQ9H1J7 359 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 RPRD1BQ9NQG5 326 aaKnown RBP11.39□□□□□ -0.59
HDAC8-210ENST00000412342 CA10Q9NS85 328 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 ZNF701Q9NV72 531 aaPredicted RBP11.39□□□□□ -0.59
HDAC8-210ENST00000412342 POU2F3Q9UKI9 436 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 ITGB1BP2Q9UKP3 347 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 BAIAP2Q9UQB8 552 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 LAMP3Q9UQV4 416 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 FKBP7Q9Y680 259 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 ATP23Q9Y6H3 246 aa11.39□□□□□ -0.59
HDAC8-210ENST00000412342 ZNF469Q96JG9 3925 aaPredicted RBP11.39□□□□□ -0.59
HDAC8-210ENST00000412342 ARFGEF3Q5TH69 2177 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 RTTNQ86VV8 2226 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 MPZL1O95297 269 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 RENP00797 406 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 OSMP13725 252 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 NOS3P29474 1203 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 CRABP1P29762 137 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 CRMP1Q14194 572 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 MSMPQ1L6U9 139 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 MST1LQ2TV78 715 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 PABPC1L2AQ5JQF8 200 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 ACSM5Q6NUN0 579 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 DNM1P34Q6PK57 102 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 SYT9Q86SS6 491 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 LRRC75A-AS1Q8N1F1 130 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 CYB561A3Q8NBI2 242 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 SLC37A3Q8NCC5 494 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 SLC26A10Q8NG04 563 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 OR4F15Q8NGB8 312 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 TEX47Q8TBZ9 253 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 TMEM171Q8WVE6 324 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 ZNRF4Q8WWF5 429 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 C11orf40Q8WZ69 217 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 BDH2Q9BUT1 245 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 OR2H1Q9GZK4 316 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 ZNF442Q9H7R0 627 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 RNF121Q9H920 327 aa11.38□□□□□ -0.59
HDAC8-210ENST00000412342 USF3Q68DE3 2245 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 H3BN98 237 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 SNAP29O95721 258 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 TFP02787 698 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 CCL2P13500 99 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 NR4A1P22736 598 aa11.37□□□□□ -0.59
HDAC8-210ENST00000412342 APEX1P27695 318 aaKnown RBP11.37□□□□□ -0.59
HDAC8-210ENST00000412342 APOBEC3AP31941 199 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms