RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 TMEM206Q9H813 350 aa-1.37□□□□□ -2.63
RNU6-554P-201ENST00000410466 FN3KRPQ9HA64 309 aa-1.37□□□□□ -2.63
RNU6-554P-201ENST00000410466 SLC7A11Q9UPY5 501 aa-1.37□□□□□ -2.63
RNU6-554P-201ENST00000410466 RPL36Q9Y3U8 105 aaKnown RBP-1.37□□□□□ -2.63
RNU6-554P-201ENST00000410466 CCDC7Q96M83 1385 aa-1.37□□□□□ -2.63
RNU6-554P-201ENST00000410466 RAD54L2Q9Y4B4 1467 aa-1.37□□□□□ -2.63
RNU6-554P-201ENST00000410466 EP300Q09472 2414 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 TRAV19A0A0A6YYK7 116 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 IGHV3-72A0A0B4J1Y9 119 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 A0A1W2PQL4 384 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 OR5H1A6NKK0 313 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 HIDE1A8MVS5 230 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 A8MXQ7 604 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 E9PMD0 336 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 SGK494L7N484 410 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 VEGFDO43915 354 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 UQCRBP14927 111 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 IL11P20809 199 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 PTPN6P29350 595 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 PTGFRP43088 359 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 ZNF138P52744 262 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 SUB1P53999 127 aaKnown RBP eCLIP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 RAD23AP54725 363 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 PKNOX1P55347 436 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 EMX1Q04741 257 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 NCBP1Q09161 790 aaKnown RBP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 CASP8Q14790 479 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 KLHL38Q2WGJ6 581 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 OR2G6Q5TZ20 316 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 METTL21CQ5VZV1 264 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 CCDC70Q6NSX1 233 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 SPINK6Q6UWN8 80 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 PIANPQ8IYJ0 282 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 ANKRD20A12PQ8NF67 263 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 OR2Z1Q8NG97 314 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 OR8K1Q8NGG5 319 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 CORO2AQ92828 525 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 CPNE4Q96A23 557 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 HSD17B10Q99714 261 aaKnown RBP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 KCTD14Q9BQ13 255 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 NIT2Q9NQR4 276 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 RHBDL2Q9NX52 303 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 MRPS18BQ9Y676 258 aaKnown RBP-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 APC2O95996 2303 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 PXDNLA1KZ92 1463 aa-1.38□□□□□ -2.63
RNU6-554P-201ENST00000410466 LRP1BQ9NZR2 4599 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 EPPK1P58107 5090 aaKnown RBP-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 ARFGEF3Q5TH69 2177 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 CCDC182A6NF36 153 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 UPK3AO75631 287 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 SLC22A5O76082 557 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 CAPN1P07384 714 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 ZNF43P17038 809 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 TGM4P49221 684 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 SCN1BQ07699 218 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 PRAMEF8Q5VWM4 474 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 SLC25A25Q6KCM7 469 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 PEX26Q7Z412 305 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 MOB3BQ86TA1 216 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 SLC25A45Q8N413 288 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 OR5L2Q8NGL0 311 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 NTAN1Q96AB6 310 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 PDCD1LG2Q9BQ51 273 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 FAM213AQ9BRX8 229 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 GGTLC1Q9BX51 225 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 DPH5Q9H2P9 285 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 COPS3Q9UNS2 423 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 TSPOAP1O95153 1857 aa-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 NYNRINQ9P2P1 1898 aaKnown RBP-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 MAP1AP78559 2803 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-554P-201ENST00000410466 TRAV34A0A0B4J273 112 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 A0A0B4J2A0 478 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 A0A1B0GVL5 298 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 H3BQ85 93 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 STX7O15400 261 aaKnown RBP-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 CHMP2AO43633 222 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 DUX1O43812 170 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 CXCL13O43927 109 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 TM7SF2O76062 418 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 ADRB2P07550 413 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 ANXA4P09525 319 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 ETS2P15036 469 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 COX5AP20674 150 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 PRDX2P32119 198 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 CCR7P32248 378 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 RORAP35398 523 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 SSTP61278 116 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 RPS14P62263 151 aaKnown RBP-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 ERVK-25P63136 954 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 TNFRSF17Q02223 184 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 KLHL40Q2TBA0 621 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 IFI44LQ53G44 452 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 AVPI1Q5T686 147 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 OR52E8Q6IFG1 317 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 FBXW12Q6X9E4 464 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 TEX43Q6ZNM6 134 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 UTS2BQ765I0 119 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 LPCAT2Q7L5N7 544 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 TMEM17Q86X19 198 aa-1.4□□□□□ -2.63
RNU6-554P-201ENST00000410466 LYPD6Q86Y78 171 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms