RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ASF1BQ9NVP2 202 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TAS2R8Q9NYW2 309 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 COMMD9Q9P000 198 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SEMA5BQ9P283 1151 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 YARS2Q9Y2Z4 477 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 KPTNQ9Y664 436 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 NUP205Q92621 2012 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TRAV1-2A0A0B4J238 106 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SPAARA0A1B0GVQ0 90 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 A0A1W2PRQ8 180 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TRBC2A0A5B9 178 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 OR51F1A6NGY5 319 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 KDM4EB2RXH2 506 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 MKRN2OSH3BPM6 223 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SCAMP2O15127 329 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 FGF16O43320 207 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 FADS1O60427 444 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ICOSLGO75144 302 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ARL6IP5O75915 188 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 KAT7O95251 611 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SLC25A27O95847 323 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 AK1P00568 194 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 WNT1P04628 370 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ATP1B1P05026 303 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TFPIP10646 304 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 RNH1P13489 461 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 ACP5P13686 325 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CEACAM1P13688 526 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ZNF44P15621 663 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CBR1P16152 277 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 AMD1P17707 334 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 DRD5P21918 477 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 IDSP22304 550 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 DGKAP23743 735 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 BDKRB2P30411 391 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CDX1P47902 265 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 CCR8P51685 355 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ZNF140P52738 457 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 NUTF2P61970 127 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 HNRNPKP61978 463 aaKnown RBP eCLIP4.92□□□□□ -1.62
CLK1-202ENST00000409403 PITX1P78337 314 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 CDK6Q00534 326 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 NAAAQ02083 359 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 PJVKQ0ZLH3 352 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 GAB1Q13480 694 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 DDX39BQ13838 428 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 PDCD11Q14690 1871 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 NDUFAF6Q330K2 333 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SAPCD1Q5SSQ6 148 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CPTPQ5TA50 214 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 OR2G6Q5TZ20 316 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 GLT8D1Q68CQ7 371 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 NOXRED1Q6NXP6 359 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SMARCD3Q6STE5 483 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 HIST2H3AQ71DI3 136 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 NDUFAF7Q7L592 441 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TSEN54Q7Z6J9 526 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 GID4Q8IVV7 300 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 GTPBP8Q8N3Z3 284 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 TEX26Q8N6G2 289 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SIDT2Q8NBJ9 832 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 RELL2Q8NC24 303 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 HJURPQ8NCD3 748 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 ZNF485Q8NCK3 441 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 OR2L5Q8NG80 312 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 OR2AK2Q8NG84 335 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 OR4F15Q8NGB8 312 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ST7LQ8TDW4 575 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 FCAMRQ8WWV6 532 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 LCN9Q8WX39 176 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 PHYHIPQ92561 330 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 HIST1H2BAQ96A08 127 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SAT2Q96F10 170 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 C14orf79Q96F83 325 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ZFP3Q96NJ6 502 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 COPS8Q99627 209 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SEPT5Q99719 369 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 TIMP4Q99727 224 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 MED10Q9BTT4 135 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ZNF471Q9BX82 626 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 ACPTQ9BZG2 426 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ULBP1Q9BZM6 244 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SLC39A8Q9C0K1 460 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CTPS2Q9NRF8 586 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CA10Q9NS85 328 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 MAN2C1Q9NTJ4 1040 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 UQCC1Q9NVA1 299 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 UXTQ9UBK9 157 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 LAMP5Q9UJQ1 280 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SNX10Q9Y5X0 201 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 LRRK2Q5S007 2527 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 PCNX2A6NKB5 2137 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TTC3P53804 2025 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 USP9YO00507 2555 aaPredicted RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 A0A087X0M5 115 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 A0A1B0GX30 115 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 ANKRD20A5PA0PJZ0 165 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 C1orf226A1L170 272 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 URADA6NGE7 173 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 CD8B2A6NJW9 211 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms