RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SLC35E2P0CK97 266 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 ELAVL4P26378 380 aaKnown RBP11.09□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF813Q6ZN06 617 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 PLPP7Q8NBV4 271 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 BHLHE23Q8NDY6 225 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 OR8U1Q8NH10 309 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 LRRC15Q8TF66 581 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 DHRS4Q9BTZ2 278 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 TXLNGYQ9BZA5 131 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 NDRG3Q9UGV2 375 aa11.09□□□□□ -0.63
SMCR8-201ENST00000406438 RACK1P63244 317 aaKnown RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 ERHP84090 104 aaKnown RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 REEP5Q00765 189 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 LYRM4Q9HD34 91 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 MT-ND4LP03901 98 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 ARR3P36575 388 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 SFT2D1Q8WV19 159 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 IP6K3Q96PC2 410 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 STACQ99469 402 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 PDLIM7Q9NR12 457 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 FGF21Q9NSA1 209 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 YIF1AO95070 293 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 TGM1P22735 817 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 UBE2IP63279 158 aaKnown RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 LMNTD1Q8N9Z9 388 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 GLIPR2Q9H4G4 154 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 GOLT1BQ9Y3E0 138 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 CEP290O15078 2479 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 GPR12P47775 334 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 MAP2K6P52564 334 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 RPS25P62851 125 aaKnown RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 TRIM61Q5EBN2 209 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 ANGPTL5Q86XS5 388 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 YIPF5Q969M3 257 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 USP3Q9Y6I4 520 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 INTS1Q8N201 2190 aaKnown RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 DDX60LQ5H9U9 1706 aaKnown RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 CTXN2P0C2S0 81 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 HIST2H3AQ71DI3 136 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 TMEM130Q8N3G9 435 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 POLDIP2Q9Y2S7 368 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 SERTM2A0A1B0GWG4 89 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 THEM4Q5T1C6 240 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 BTNL8Q6UX41 500 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 GRINAQ7Z429 371 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 CLDN22Q8N7P3 220 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 OR6K3Q8NGY3 331 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 CHST8Q9H2A9 424 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 FBXL4Q9UKA2 621 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 GPR55Q9Y2T6 319 aaPredicted RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 HS3ST3A1Q9Y663 406 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 ATP23Q9Y6H3 246 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 BMI1P35226 326 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 PRTGQ2VWP7 1150 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 SLC25A43Q8WUT9 341 aaPredicted RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 TMEM255BQ8WV15 326 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 TRIB1Q96RU8 372 aa11.08□□□□□ -0.64
SMCR8-201ENST00000406438 ZMAT3Q9HA38 289 aaKnown RBP11.08□□□□□ -0.64
SMCR8-201ENST00000406438 IVDP26440 423 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 SPCS2Q15005 226 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 LDLRAD1Q5T700 205 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 KCTD11Q693B1 232 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 FAM185AQ8N0U4 392 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 OR2T11Q8NH01 316 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 TMEM265A0A087WTH1 108 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 OR2C1O95371 312 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 HOXD12P35452 270 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 FOXK2Q01167 660 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 IFI44Q8TCB0 444 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 DHCR7Q9UBM7 475 aaKnown RBP11.07□□□□□ -0.64
SMCR8-201ENST00000406438 KIR2DS1A0A191URI9 304 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 CSO75390 466 aaKnown RBP11.07□□□□□ -0.64
SMCR8-201ENST00000406438 KIR2DS4P43632 304 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 RGRP47804 291 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 DAPP51397 102 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 KIR2DS1Q14954 304 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 C6orf15Q6UXA7 325 aaPredicted RBP11.07□□□□□ -0.64
SMCR8-201ENST00000406438 PRSS16Q9NQE7 514 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 SLC22A11Q9NSA0 550 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 RBFOX1Q9NWB1 397 aaKnown RBP11.07□□□□□ -0.64
SMCR8-201ENST00000406438 CHRNA9Q9UGM1 479 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 OR6C76A6NM76 312 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 OR1M1Q8NGA1 313 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 SLAMF8Q9P0V8 285 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 PPP1R3CQ9UQK1 317 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 USP54Q70EL1 1684 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 OPCMLQ14982 345 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 IER2Q9BTL4 223 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 TMEM38AQ9H6F2 299 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 SPACA1Q9HBV2 294 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 EMC7Q9NPA0 242 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 SSC5DA1L4H1 1573 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 MYO7BQ6PIF6 2116 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 SLCO2B1O94956 709 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 CRYBA1P05813 215 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 RFX2P48378 723 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 NPY4RP50391 375 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 HSF1Q00613 529 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms