RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 LSM5Q9Y4Y9 91 aaKnown RBP12.79□□□□□ -0.36
DUSP28-202ENST00000405954 C9orf170A2RU37 121 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 CDC42EP2O14613 210 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 CTNSO60931 367 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 IGSF6O95976 241 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 ERCC1P07992 297 aaPredicted RBP12.79□□□□□ -0.36
DUSP28-202ENST00000405954 TMEM11P17152 192 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 FRKP42685 505 aaPredicted RBP12.79□□□□□ -0.36
DUSP28-202ENST00000405954 TMEM115Q12893 351 aaPredicted RBP12.79□□□□□ -0.36
DUSP28-202ENST00000405954 RALGAPA2Q2PPJ7 1873 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 ZXDCQ2QGD7 858 aaPredicted RBP12.79□□□□□ -0.36
DUSP28-202ENST00000405954 DMKNQ6E0U4 476 aaPredicted RBP12.79□□□□□ -0.36
DUSP28-202ENST00000405954 FAM129CQ86XR2 697 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 FAM185AQ8N0U4 392 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 OR4K14Q8NGD5 310 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 OR10AD1Q8NGE0 317 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 ASB13Q8WXK3 278 aa12.79□□□□□ -0.36
DUSP28-202ENST00000405954 DCDC2BA2VCK2 349 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 A6NNC1 897 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 K7EPK0 472 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 GEMIN2O14893 280 aaKnown RBP12.78□□□□□ -0.36
DUSP28-202ENST00000405954 OR1F1O43749 312 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 CD74P04233 296 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 JMJD7P0C870 316 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 MDKP21741 143 aaPredicted RBP12.78□□□□□ -0.36
DUSP28-202ENST00000405954 FAM71E2Q8N5Q1 922 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 ZG16BQ96DA0 208 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 ULBP3Q9BZM4 244 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 CKLFQ9UBR5 152 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 AK1P00568 194 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 TACSTD2P09758 323 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 GAAP10253 952 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 CD37P11049 281 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 PSMA3P25788 255 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 HTR2CP28335 458 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 RAB1AP62820 205 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 RAB11BQ15907 218 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 ZNF343Q6P1L6 599 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 PEG10Q86TG7 708 aaKnown RBP12.78□□□□□ -0.36
DUSP28-202ENST00000405954 RFLNBQ8N5W9 214 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 LILRA3Q8N6C8 439 aaPredicted RBP12.78□□□□□ -0.36
DUSP28-202ENST00000405954 PLPP5Q8NEB5 264 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 FAM213BQ8TBF2 198 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 POC1BQ8TC44 478 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 VOPP1Q96AW1 172 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 TEX101Q9BY14 249 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 LUZP4Q9P127 313 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 CACFD1Q9UGQ2 172 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 MBD1Q9UIS9 605 aaPredicted RBP12.78□□□□□ -0.36
DUSP28-202ENST00000405954 PLAGL1Q9UM63 463 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 MEMO1Q9Y316 297 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 A0A0A6YYH2 397 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 A6NJ64 397 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 XRCC3O43542 346 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 TSPAN6O43657 245 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 SRPX2O60687 465 aaPredicted RBP12.78□□□□□ -0.36
DUSP28-202ENST00000405954 RDH16O75452 317 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 ITGA5P08648 1049 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 ELFN1P0C7U0 828 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 LY6G6FQ5SQ64 297 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 ATPAF1Q5TC12 328 aaPredicted RBP12.78□□□□□ -0.36
DUSP28-202ENST00000405954 SLC22A25Q6T423 547 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 STAC2Q6ZMT1 411 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 GDF7Q7Z4P5 450 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 HSD17B11Q8NBQ5 300 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 IL17FQ96PD4 163 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 NDUFAF3Q9BU61 184 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 MRI1Q9BV20 369 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
DUSP28-202ENST00000405954 TMEM184BQ9Y519 407 aaPredicted RBP12.78□□□□□ -0.36
DUSP28-202ENST00000405954 CNOT4O95628 575 aaKnown RBP12.77□□□□□ -0.36
DUSP28-202ENST00000405954 PI3P19957 117 aa12.77□□□□□ -0.36
DUSP28-202ENST00000405954 HNRNPKP61978 463 aaKnown RBP eCLIP12.77□□□□□ -0.36
DUSP28-202ENST00000405954 CAMKMTQ7Z624 323 aa12.77□□□□□ -0.36
DUSP28-202ENST00000405954 DND1Q8IYX4 353 aaKnown RBP12.77□□□□□ -0.36
DUSP28-202ENST00000405954 SMARCD2Q92925 531 aa12.77□□□□□ -0.36
DUSP28-202ENST00000405954 SAT2Q96F10 170 aaPredicted RBP12.77□□□□□ -0.36
DUSP28-202ENST00000405954 PGLYRP3Q96LB9 341 aa12.77□□□□□ -0.36
DUSP28-202ENST00000405954 STEAP1Q9UHE8 339 aa12.77□□□□□ -0.36
DUSP28-202ENST00000405954 MSRAQ9UJ68 235 aa12.77□□□□□ -0.36
DUSP28-202ENST00000405954 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 P2RX6O15547 441 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 STK17BO94768 372 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
DUSP28-202ENST00000405954 MBPP02686 304 aaPredicted RBP12.77□□□□□ -0.37
DUSP28-202ENST00000405954 CALCBP10092 127 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 ADPRHP54922 357 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 EFNB1P98172 346 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 NCR3LG1Q68D85 454 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 SSX7Q7RTT5 188 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 COMTD1Q86VU5 262 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 MAML2Q8IZL2 1156 aaPredicted RBP12.77□□□□□ -0.37
DUSP28-202ENST00000405954 PFN4Q8NHR9 129 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 TOX2Q96NM4 488 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 PRRT1Q99946 306 aa12.77□□□□□ -0.37
DUSP28-202ENST00000405954 GPR55Q9Y2T6 319 aaPredicted RBP12.77□□□□□ -0.37
DUSP28-202ENST00000405954 BHLHE40O14503 412 aa12.76□□□□□ -0.37
DUSP28-202ENST00000405954 GPRIN2O60269 458 aa12.76□□□□□ -0.37
DUSP28-202ENST00000405954 KLF8O95600 359 aaPredicted RBP12.76□□□□□ -0.37
DUSP28-202ENST00000405954 SLC25A4P12235 298 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms