RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 DEFB127Q9H1M4 99 aa11.81□□□□□ -0.52
CEACAM1-206ENST00000403136 KCNN2Q9H2S1 579 aa11.81□□□□□ -0.52
CEACAM1-206ENST00000403136 TPK1Q9H3S4 243 aa11.81□□□□□ -0.52
CEACAM1-206ENST00000403136 ELOVL3Q9HB03 270 aa11.81□□□□□ -0.52
CEACAM1-206ENST00000403136 SPTBN2O15020 2390 aa11.81□□□□□ -0.52
CEACAM1-206ENST00000403136 HSPB2A8KAH6 182 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 SC5DO75845 299 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 SERPINA3P01011 423 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 ITGB2P05107 769 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 CLEC2LP0C7M8 214 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 OPRL1P41146 370 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 CSNK1A1P48729 337 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 NANOS3P60323 173 aaKnown RBP11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 SRYQ05066 204 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 MXD1Q05195 221 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 HSPB2Q16082 182 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 ACSM3Q53FZ2 586 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 CEACAM19Q7Z692 300 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 TMEM123Q8N131 208 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 MEIOBQ8N635 442 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 OR10H5Q8NGA6 315 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 OR6N1Q8NGY5 312 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 NEIL3Q8TAT5 605 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 SLC25A46Q96AG3 418 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 ZNF775Q96BV0 537 aaPredicted RBP11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 SMAD5Q99717 465 aaKnown RBP11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 MROQ9BYG7 248 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 SEC61A2Q9H9S3 476 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 WASF3Q9UPY6 502 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 FLVCR1Q9Y5Y0 555 aa11.8□□□□□ -0.52
CEACAM1-206ENST00000403136 TRAV17A0A0B4J275 112 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 A0A1W2PPL8 197 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 DVL2O14641 736 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 GPRIN2O60269 458 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 CYTIPO60759 359 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 ACTL6AO96019 429 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 SELENOPP49908 381 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 ZNF133P52736 654 aaPredicted RBP11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 RASGEF1BQ0VAM2 473 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 ALKBH1Q13686 389 aaKnown RBP11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 ABLIM2Q6H8Q1 611 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 LRRN1Q6UXK5 716 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 FCRLAQ7L513 359 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 MAP6Q96JE9 813 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 PDCD1LG2Q9BQ51 273 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 BARHL1Q9BZE3 327 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 ZDHHC11Q9H8X9 412 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 FRRS1LQ9P0K9 344 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 A0A075B6Q4 140 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 RPS11P62280 158 aaKnown RBP eCLIP11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 KCNMB1Q16558 191 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 ZNF829Q3KNS6 432 aaPredicted RBP11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 PHYHD1Q5SRE7 291 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 C10orf128Q5T292 105 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 PAMR1Q6UXH9 720 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 DCXRQ7Z4W1 244 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 LINC00346Q8IVM7 164 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 C20orf196Q8IYI0 205 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 TEX19Q8NA77 164 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 OR2G2Q8NGZ5 317 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 OR52N5Q8NH56 324 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 ST7LQ8TDW4 575 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 RNF128Q8TEB7 428 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 HSD17B8Q92506 261 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 PNPLA2Q96AD5 504 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 C6orf62Q9GZU0 229 aaPredicted RBP11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 PPIL3Q9H2H8 161 aaKnown RBP11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 LDAHQ9H6V9 325 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 PAQR5Q9NXK6 330 aaPredicted RBP11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 CYB5R1Q9UHQ9 305 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 FOXD3Q9UJU5 478 aaPredicted RBP11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 RCE1Q9Y256 329 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 ZNF281Q9Y2X9 895 aa11.79□□□□□ -0.52
CEACAM1-206ENST00000403136 CACNA1CQ13936 2221 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 TRGV5A0A0B4J1U4 118 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 SHISA3A0PJX4 238 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 CASKO14936 926 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 ZFPL1O95159 310 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 CDAP32320 146 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 NTF4P34130 210 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 FDX2Q6P4F2 183 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 CORO6Q6QEF8 472 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 DEGS2Q6QHC5 323 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 UNQ9370/PRO34162Q6UXP9 181 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 OR13C5Q8NGS8 318 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 SNIP1Q8TAD8 396 aaKnown RBP11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 KCNS3Q9BQ31 491 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 UGT2A1Q9Y4X1 527 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 LIPGQ9Y5X9 500 aa11.78□□□□□ -0.52
CEACAM1-206ENST00000403136 A0A1B0GTH9 108 aa11.77□□□□□ -0.52
CEACAM1-206ENST00000403136 CLDN25C9JDP6 229 aa11.77□□□□□ -0.52
CEACAM1-206ENST00000403136 DHHO43323 396 aa11.77□□□□□ -0.52
CEACAM1-206ENST00000403136 SLC43A1O75387 559 aa11.77□□□□□ -0.52
CEACAM1-206ENST00000403136 ZNF254O75437 659 aa11.77□□□□□ -0.52
CEACAM1-206ENST00000403136 GATBO75879 557 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms