RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 IGFL2Q6UWQ7 119 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 ZNF679Q8IYX0 411 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 TMEM123Q8N131 208 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 ROBO4Q8WZ75 1007 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 BORCS5Q969J3 196 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 ELOVL3Q9HB03 270 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 HMG20AQ9NP66 347 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 PLEKHB1Q9UF11 243 aaPredicted RBP22.76■■□□□ 1.23
CPNE1-205ENST00000401607 CEP250Q9BV73 2442 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 A0A087WV48 116 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 TLX3O43711 291 aaPredicted RBP22.76■■□□□ 1.23
CPNE1-205ENST00000401607 GPRIN2O60269 458 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 AQP8O94778 261 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 QDPRP09417 244 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 CAV3P56539 151 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 PPIAP62937 165 aaKnown RBP22.76■■□□□ 1.23
CPNE1-205ENST00000401607 ALKBH1Q13686 389 aaKnown RBP22.76■■□□□ 1.23
CPNE1-205ENST00000401607 LINC00346Q8IVM7 164 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 OR52N5Q8NH56 324 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 ST7LQ8TDW4 575 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 TMEM54Q969K7 222 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 ZNF845Q96IR2 970 aaPredicted RBP22.76■■□□□ 1.23
CPNE1-205ENST00000401607 SMURF1Q9HCE7 757 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 FRRS1LQ9P0K9 344 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 A0A1B0GTH9 108 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 IQCMA0A1B0GVH7 501 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 A0A1W2PPL8 197 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 ZNF716A6NP11 495 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 GFRA3O60609 400 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 ZNF432O94892 652 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 ZFPL1O95159 310 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 SERPINA3P01011 423 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 CALRP27797 417 aaKnown RBP22.75■■□□□ 1.23
CPNE1-205ENST00000401607 MTNR1BP49286 362 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 CLDN18P56856 261 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 PHYHD1Q5SRE7 291 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 BTLAQ7Z6A9 289 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 TMEM178AQ8NBL3 297 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 RGP1Q92546 391 aaPredicted RBP22.75■■□□□ 1.23
CPNE1-205ENST00000401607 WDR12Q9GZL7 423 aaKnown RBP22.75■■□□□ 1.23
CPNE1-205ENST00000401607 QPCTLQ9NXS2 382 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 GLTPQ9NZD2 209 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 PEX16Q9Y5Y5 336 aa22.75■■□□□ 1.23
CPNE1-205ENST00000401607 CTDSP2O14595 271 aa22.74■■□□□ 1.23
CPNE1-205ENST00000401607 CSNK1A1P48729 337 aa22.74■■□□□ 1.23
CPNE1-205ENST00000401607 ZMAT1Q5H9K5 638 aa22.74■■□□□ 1.23
CPNE1-205ENST00000401607 KCTD18Q6PI47 426 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-205ENST00000401607 SPATC1Q76KD6 591 aa22.74■■□□□ 1.23
CPNE1-205ENST00000401607 CPNE4Q96A23 557 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-205ENST00000401607 CUL9Q8IWT3 2517 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 ITGB2P05107 769 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 ZNF708P17019 499 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 SELENOPP49908 381 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 INAQ16352 499 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 DCXRQ7Z4W1 244 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 SLC22A16Q86VW1 577 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 OR2G2Q8NGZ5 317 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 MROQ9BYG7 248 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 CRNNQ9UBG3 495 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-205ENST00000401607 ZNF281Q9Y2X9 895 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 UGT2A1Q9Y4X1 527 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 FLVCR1Q9Y5Y0 555 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 KCNMB2Q9Y691 235 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 NCR1O76036 304 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 CDAP32320 146 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 ZNF133P52736 654 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-205ENST00000401607 PDSS1Q5T2R2 415 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 CORO6Q6QEF8 472 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 KRT77Q7Z794 578 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 PRSS35Q8N3Z0 413 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 FAM109AQ8N4B1 249 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 TEX19Q8NA77 164 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 OR10H5Q8NGA6 315 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 RNF128Q8TEB7 428 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 TIGARQ9NQ88 270 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 CYB5R1Q9UHQ9 305 aa22.73■■□□□ 1.23
CPNE1-205ENST00000401607 CEACAM4O75871 244 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 NR2C1P13056 603 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 S100A5P33763 92 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 FOXC1Q12948 553 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 RNFT1Q5M7Z0 435 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 FDX2Q6P4F2 183 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 UNQ9370/PRO34162Q6UXP9 181 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 OR6N1Q8NGY5 312 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 OR14A2Q96R54 314 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 SEC61A2Q9H9S3 476 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 EMC7Q9NPA0 242 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 ACKR4Q9NPB9 350 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 FOXD3Q9UJU5 478 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-205ENST00000401607 LRP12Q9Y561 859 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 LIPGQ9Y5X9 500 aa22.72■■□□□ 1.23
CPNE1-205ENST00000401607 OR4C45A6NMZ5 311 aa22.71■■□□□ 1.23
CPNE1-205ENST00000401607 CYTIPO60759 359 aa22.71■■□□□ 1.23
CPNE1-205ENST00000401607 SPINK2P20155 84 aa22.71■■□□□ 1.23
CPNE1-205ENST00000401607 NTF4P34130 210 aa22.71■■□□□ 1.23
CPNE1-205ENST00000401607 YIF1BQ5BJH7 314 aa22.71■■□□□ 1.23
CPNE1-205ENST00000401607 C10orf128Q5T292 105 aa22.71■■□□□ 1.23
CPNE1-205ENST00000401607 OR7E24Q6IFN5 339 aa22.71■■□□□ 1.23
CPNE1-205ENST00000401607 PAMR1Q6UXH9 720 aa22.71■■□□□ 1.23
CPNE1-205ENST00000401607 NR2C2APQ86WQ0 139 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms