RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 AGPAT4Q9NRZ5 378 aa5.57□□□□□ -1.52
CLIP4-202ENST00000401605 HAO2Q9NYQ3 351 aa5.57□□□□□ -1.52
CLIP4-202ENST00000401605 TMEM181Q9P2C4 612 aa5.57□□□□□ -1.52
CLIP4-202ENST00000401605 RCE1Q9Y256 329 aa5.57□□□□□ -1.52
CLIP4-202ENST00000401605 PLEKHM1Q9Y4G2 1056 aa5.57□□□□□ -1.52
CLIP4-202ENST00000401605 ENTPD2Q9Y5L3 495 aa5.57□□□□□ -1.52
CLIP4-202ENST00000401605 RAI2Q9Y5P3 530 aa5.57□□□□□ -1.52
CLIP4-202ENST00000401605 SMG1Q96Q15 3661 aaKnown RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 DSPP15924 2871 aaKnown RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TRBV7-9A0A0J9YWB2 115 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 FAM237BA0A1B0GVD1 139 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 MBD3L4A6NDZ8 208 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 MBD3L3A6NE82 208 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 B4DXG7 233 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 H7C417 338 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 NTN3O00634 580 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ZNF749O43361 778 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 NRP2O60462 931 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 FADS2O95864 444 aaKnown RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 WNT11O96014 354 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 IFNA5P01569 189 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TCRBP04435 133 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CD1AP06126 327 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CELA2BP08218 269 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 NMBP08949 121 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 OR56A5P0C7T3 313 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ZNF44P15621 663 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CSNK2A2P19784 350 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 RAB6AP20340 208 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 MAKP20794 623 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TIMP3P35625 211 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CTSCP53634 463 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TMPRSS3P57727 454 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 YBX1P67809 324 aaKnown RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CSNK2A1P68400 391 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 SSBP2P81877 361 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 MVKQ03426 396 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TMEM115Q12893 351 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 EIF3IQ13347 325 aaKnown RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TAF9Q16594 264 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PDLIM3Q53GG5 364 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TMEM236Q5W0B7 351 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TMEM88Q6PEY1 159 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TMED4Q7Z7H5 227 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ZNF546Q86UE3 836 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 P2RY8Q86VZ1 359 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PDZD9Q8IXQ8 264 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CSNK2A3Q8NEV1 391 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PXT1Q8NFP0 134 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 OR9K2Q8NGE7 335 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 OR56A4Q8NGH8 313 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 OR5L1Q8NGL2 311 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TMEM186Q96B77 213 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CCDC126Q96EE4 140 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PRR11Q96HE9 360 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 POM121L2Q96KW2 1035 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 NEDD4LQ96PU5 975 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 SGPP1Q9BX95 441 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 TMEM185BQ9H7F4 350 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 MANSC1Q9H8J5 431 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ISYNA1Q9NPH2 558 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 RASL12Q9NYN1 266 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ADA2Q9NZK5 511 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 OPTCQ9UBM4 332 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 SLC25A10Q9UBX3 287 aaPredicted RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PHF11Q9UIL8 331 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 GOLGA4Q13439 2230 aaKnown RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 A0A087WWL8 130 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 FITM1A5D6W6 292 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ADARB2-AS1A8MUL3 147 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 GFYI3L273 518 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ZNF264O43296 627 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 HOXB5P09067 269 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 SBK3P0C264 359 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CR2P20023 1033 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 HOXA5P20719 270 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 FPR1P21462 350 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PSMB5P28074 263 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 BSGP35613 385 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ID1P41134 155 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 IDH2P48735 452 aaKnown RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ATP5J2P56134 94 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 RPS15P62841 145 aaKnown RBP5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CXADRP78310 365 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CCL7P80098 99 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 CDK6Q00534 326 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 OLIG2Q13516 323 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PRPSAP1Q14558 356 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PCLAFQ15004 111 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ABRAXAS2Q15018 415 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ADPRMQ3LIE5 342 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 PYCR3Q53H96 274 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 HIST2H3PS2Q5TEC6 136 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 SAMD13Q5VXD3 122 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 LRRC8EQ6NSJ5 796 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 DEFB107AQ8IZN7 70 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 MMP21Q8N119 569 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 ZBTB2Q8N680 514 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 EXD3Q8N9H8 876 aa5.56□□□□□ -1.52
CLIP4-202ENST00000401605 OR2G2Q8NGZ5 317 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms