RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TUBAL3A6NHL2 446 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 OR8G3PP0DMU2 310 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 GAAP10253 952 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 GABRB1P18505 474 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 SLC2A5P22732 501 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 CDC42P60953 191 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 HSF2Q03933 536 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 KEAP1Q14145 624 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 FAM27BQ5VT28 67 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 ENTHD1Q8IYW4 607 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF511Q8NB15 262 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 TRUB1Q8WWH5 349 aaKnown RBP13.93□□□□□ -0.18
HMGA1-204ENST00000401473 ZC3HAV1LQ96H79 300 aaKnown RBP13.93□□□□□ -0.18
HMGA1-204ENST00000401473 POLE4Q9NR33 117 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 RASSF1Q9NS23 344 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 MRPL22Q9NWU5 206 aaKnown RBP13.93□□□□□ -0.18
HMGA1-204ENST00000401473 SLC25A15Q9Y619 301 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 AKAP6Q13023 2319 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 SH3D21A4FU49 640 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 HLA-HP01893 362 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 NPR2P20594 1047 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 PAICSP22234 425 aaKnown RBP13.93□□□□□ -0.18
HMGA1-204ENST00000401473 VHLP40337 213 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 CENPAP49450 140 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 GLO1Q04760 184 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 PIGFQ07326 219 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 NRN1LQ496H8 165 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 KLHL12Q53G59 568 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 C6orf52Q5T4I8 152 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 TTC23Q5W5X9 447 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 SP5Q6BEB4 398 aaPredicted RBP13.93□□□□□ -0.18
HMGA1-204ENST00000401473 SEZ6L2Q6UXD5 910 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 IZUMO2Q6UXV1 221 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 DMRTC2Q8IXT2 367 aaPredicted RBP13.93□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF555Q8NEP9 628 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 PROKR2Q8NFJ6 384 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 SLC26A10Q8NG04 563 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 RHOXF1Q8NHV9 184 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 C11orf40Q8WZ69 217 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 FBXO17Q96EF6 278 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 TEAD3Q99594 435 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 C1QTNF6Q9BXI9 259 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 PRRG3Q9BZD7 231 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 OR10A4Q9H209 315 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 EMC7Q9NPA0 242 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 B3GNT2Q9NY97 397 aa13.93□□□□□ -0.18
HMGA1-204ENST00000401473 CSMD2Q7Z408 3487 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 TVP23AA6NH52 213 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 CAPGP40121 348 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 ENDOGQ14249 297 aaKnown RBP13.92□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF691Q5VV52 312 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 ALKBH2Q6NS38 261 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 DNM1P34Q6PK57 102 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 P2RY8Q86VZ1 359 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 C17orf78Q8N4C9 275 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 HSD17B8Q92506 261 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 MED18Q9BUE0 208 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF416Q9BWM5 594 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 VCX3BQ9H321 246 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 WDR76Q9H967 626 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 NOX3Q9HBY0 568 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 IMPAD1Q9NX62 359 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 CRIM1Q9NZV1 1036 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 ABCA12Q86UK0 2595 aa13.92□□□□□ -0.18
HMGA1-204ENST00000401473 ITPR2Q14571 2701 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 H0YAE9 185 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 RPS27P42677 84 aaKnown RBP13.91□□□□□ -0.18
HMGA1-204ENST00000401473 GUCA1AP43080 201 aaPredicted RBP13.91□□□□□ -0.18
HMGA1-204ENST00000401473 ISL1P61371 349 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 SNRPGP62308 76 aaKnown RBP13.91□□□□□ -0.18
HMGA1-204ENST00000401473 APOFQ13790 326 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 NXNL2Q5VZ03 156 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.91□□□□□ -0.18
HMGA1-204ENST00000401473 OR6K6Q8NGW6 343 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF75AQ96N20 296 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 NDRG3Q9UGV2 375 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 SPG11Q96JI7 2443 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 CCDC182A6NF36 153 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 PRODHO43272 600 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 GLCEO94923 617 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 HLA-DQA2P01906 255 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 MMP7P09237 267 aaPredicted RBP13.91□□□□□ -0.18
HMGA1-204ENST00000401473 PSKH1P11801 424 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 HOXB1P14653 301 aaPredicted RBP13.91□□□□□ -0.18
HMGA1-204ENST00000401473 MSR1P21757 451 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 TEKQ02763 1124 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 KCNMB1Q16558 191 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 SLC25A30Q5SVS4 291 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 USP51Q70EK9 711 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 SLC16A14Q7RTX9 510 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 APH1BQ8WW43 257 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 ZMYND19Q96E35 227 aaPredicted RBP13.91□□□□□ -0.18
HMGA1-204ENST00000401473 USB1Q9BQ65 265 aaKnown RBP13.91□□□□□ -0.18
HMGA1-204ENST00000401473 NPAP1Q9NZP6 1156 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 DNAJC27Q9NZQ0 273 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 MOKQ9UQ07 419 aa13.91□□□□□ -0.18
HMGA1-204ENST00000401473 ARPC4-TTLL3A0A0A6YYG9 625 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 PPP3CBP16298 524 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 FMO3P31513 532 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 KIR2DL3P43628 341 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms