RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SDHAF2Q9NX18 166 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 GLSO94925 669 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-204ENST00000400337 ELK1P19419 428 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 PLA2G7Q13093 441 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 PEA15Q15121 130 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 EMC4Q5J8M3 183 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 WDSUB1Q8N9V3 476 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 LOXHD1Q8IVV2 1947 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 VAMP5O95183 116 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 PPP3CBP16298 524 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 TGFBR1P36897 503 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 HYAL1Q12794 435 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 WDR5BQ86VZ2 330 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 LACC1Q8IV20 430 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 SUMF2Q8NBJ7 301 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 SEMA6DQ8NFY4 1073 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 AP1S3Q96PC3 154 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 SEC22CQ9BRL7 303 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 ABHD6Q9BV23 337 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 ZNF225Q9UK10 706 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 ANKRD61A6NGH8 418 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 ARGFXA6NJG6 315 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 E9PI62 339 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 TUSC2O75896 110 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 SERPINA7P05543 415 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 HTR4Q13639 388 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 OGFOD3Q6PK18 319 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 SLC35B4Q969S0 331 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 SLAMF6Q96DU3 332 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■□□□□ 9.7
COL18A1-204ENST00000400337 SLC6A13Q9NSD5 602 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 ANKRD33BA6NCL7 494 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 SMLR1H3BR10 107 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 NPY4RP50391 375 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 TEX19Q8NA77 164 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 OR51E1Q8TCB6 317 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 PCNPQ8WW12 178 aaKnown RBP16.59■□□□□ 0.25
COL18A1-204ENST00000400337 AGERQ15109 404 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 Q6ZNX1 250 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 DOK3Q7L591 496 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 BATF2Q8N1L9 274 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 ZADH2Q8N4Q0 377 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 LILRB4Q8NHJ6 448 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 LRRC61Q9BV99 259 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 OR2J2O76002 312 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 GUSBP08236 651 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 ZGLP1P0C6A0 271 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 ZNF683Q8IZ20 524 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 RDH10Q8IZV5 341 aa16.59■□□□□ 0.25
COL18A1-204ENST00000400337 RPP25Q9BUL9 199 aaKnown RBP16.59■□□□□ 0.25
COL18A1-204ENST00000400337 TCEAL2Q9H3H9 227 aaPredicted RBP16.59■□□□□ 0.25
COL18A1-204ENST00000400337 METTL12A8MUP2 240 aa16.58■□□□□ 0.25
COL18A1-204ENST00000400337 STMND1H3BQB6 276 aa16.58■□□□□ 0.25
COL18A1-204ENST00000400337 WDR88Q6ZMY6 472 aa16.58■□□□□ 0.25
COL18A1-204ENST00000400337 SYT13Q7L8C5 426 aa16.58■□□□□ 0.25
COL18A1-204ENST00000400337 SLC25A19Q9HC21 320 aa16.58■□□□□ 0.25
COL18A1-204ENST00000400337 MED29Q9NX70 200 aa16.58■□□□□ 0.25
COL18A1-204ENST00000400337 PAPPA2Q9BXP8 1791 aa16.58■□□□□ 0.25
COL18A1-204ENST00000400337 PRR35P0CG20 571 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 RP1L1Q8IWN7 2480 aaPredicted RBP16.58■□□□□ 0.24
COL18A1-204ENST00000400337 FRZBQ92765 325 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 MSI2Q96DH6 328 aaKnown RBP16.58■□□□□ 0.24
COL18A1-204ENST00000400337 LANCL2Q9NS86 450 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 OLFM2O95897 454 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 TBC1D28Q2M2D7 210 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 POC1BQ8TC44 478 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 NT5CQ8TCD5 201 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 IGLV3-16A0A075B6K0 115 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 SELENBP1Q13228 472 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 TMEM215Q68D42 235 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 LPCAT3Q6P1A2 487 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 OR51S1Q8NGJ8 323 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 OR13C5Q8NGS8 318 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 GPR173Q9NS66 373 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 PPIL1Q9Y3C6 166 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 BOLA1Q9Y3E2 137 aa16.58■□□□□ 0.24
COL18A1-204ENST00000400337 PHF1O43189 567 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-204ENST00000400337 FUCA1P04066 466 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 YBX1P67809 324 aaKnown RBP16.57■□□□□ 0.24
COL18A1-204ENST00000400337 PDLIM3Q53GG5 364 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-204ENST00000400337 ST8SIA1Q92185 356 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 UPRTQ96BW1 309 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 LRFN5Q96NI6 719 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 PLAC1Q9HBJ0 212 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 SLC5A6Q9Y289 635 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 KCNE3Q9Y6H6 103 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 LTBP4Q8N2S1 1624 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 ARRDC5A6NEK1 342 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 OR6C6A6NF89 314 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 GRPP07492 148 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 CHRM2P08172 466 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 EBPQ15125 230 aaKnown RBP16.57■□□□□ 0.24
COL18A1-204ENST00000400337 OR52W1Q6IF63 320 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 TCTEX1D2Q8WW35 142 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 MRGPRX3Q96LB0 322 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 CCDC74BQ96LY2 380 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 PLA2G2FQ9BZM2 168 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 DEFB127Q9H1M4 99 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 SLC22A11Q9NSA0 550 aa16.57■□□□□ 0.24
COL18A1-204ENST00000400337 LMO7DNF2Z398 122 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms