RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SFXN4Q6P4A7 337 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 RPS19BP1Q86WX3 136 aaKnown RBP12.61□□□□□ -0.39
VAPA-202ENST00000400000 EGFL6Q8IUX8 553 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 OR13C5Q8NGS8 318 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 C11orf40Q8WZ69 217 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 TOX2Q96NM4 488 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 ASB16Q96NS5 453 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 SLC46A1Q96NT5 459 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 FN3KRPQ9HA64 309 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 PRELID3BQ9Y3B1 194 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 A0A1W2PRD5 423 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 A0A1W2PRF3 423 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 A0A1W2PRM7 423 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 ONECUT2O95948 504 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 PI3P19957 117 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 CDAP32320 146 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 GALEQ14376 348 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 FAM199XQ6PEV8 388 aaPredicted RBP12.61□□□□□ -0.39
VAPA-202ENST00000400000 PLPP5Q8NEB5 264 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 FGF14Q92915 247 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 RIMS4Q9H426 269 aaPredicted RBP12.61□□□□□ -0.39
VAPA-202ENST00000400000 ACOXLQ9NUZ1 547 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 THAP10Q9P2Z0 257 aaPredicted RBP12.61□□□□□ -0.39
VAPA-202ENST00000400000 ABCD4O14678 606 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 IGHEP01854 428 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 GCAP28676 217 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 MLLT11Q13015 90 aaPredicted RBP12.61□□□□□ -0.39
VAPA-202ENST00000400000 PRAMEF5Q5TYX0 476 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 PRAMEF6Q5VXH4 476 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 FBXO17Q96EF6 278 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 CPPED1Q9BRF8 314 aaPredicted RBP12.61□□□□□ -0.39
VAPA-202ENST00000400000 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 NPFFR2Q9Y5X5 522 aa12.61□□□□□ -0.39
VAPA-202ENST00000400000 A0A0B4J203 849 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 C4orf47A7E2U8 309 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 UBE2MP61081 183 aaKnown RBP12.6□□□□□ -0.39
VAPA-202ENST00000400000 ZNF626Q68DY1 528 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 RBMS3Q6XE24 437 aaKnown RBP12.6□□□□□ -0.39
VAPA-202ENST00000400000 SIAH3Q8IW03 269 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 CELF2-AS1Q8N7Q2 184 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 SEMA6DQ8NFY4 1073 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 OR8U1Q8NH10 309 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 UCN3Q969E3 161 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 ZBED3Q96IU2 234 aaPredicted RBP12.6□□□□□ -0.39
VAPA-202ENST00000400000 SLA2Q9H6Q3 261 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 CSF3P09919 207 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 IL3RAP26951 378 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 RAB13P51153 203 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 NAXDQ8IW45 347 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 RABL2AQ9UBK7 228 aaPredicted RBP12.6□□□□□ -0.39
VAPA-202ENST00000400000 RABL2BQ9UNT1 228 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 SEC14L6B5MCN3 397 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 PLPP1O14494 284 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 IL2RAP01589 272 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 THBS1P07996 1170 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 OPRM1P35372 400 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 GFERP55789 205 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 SRSF5Q13243 272 aaKnown RBP12.6□□□□□ -0.39
VAPA-202ENST00000400000 BCORP1Q8N888 145 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 OR10AD1Q8NGE0 317 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 ZNF436Q9C0F3 470 aaPredicted RBP12.6□□□□□ -0.39
VAPA-202ENST00000400000 NECAP2Q9NVZ3 263 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 GAB2Q9UQC2 676 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 UBR2Q8IWV8 1755 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 NAP1L6A6NFF2 107 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 TMEM221A6NGB7 291 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 GPR37O15354 613 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 NME2P1O60361 137 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 DNAJB6O75190 326 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 BAMBIQ13145 260 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 KDM4DQ6B0I6 523 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 OR51F2Q8NH61 342 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 RBM14Q96PK6 669 aaKnown RBP12.6□□□□□ -0.39
VAPA-202ENST00000400000 SSSCA1O60232 199 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 CDC14BO60729 498 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 UBBP0CG47 229 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 UBCP0CG48 685 aaKnown RBP12.6□□□□□ -0.39
VAPA-202ENST00000400000 ZXDAP98168 799 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 SPANXN5Q5MJ07 72 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 DHRS13Q6UX07 377 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 ORAI1Q96D31 301 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 QPCTLQ9NXS2 382 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 CEPT1Q9Y6K0 416 aa12.6□□□□□ -0.39
VAPA-202ENST00000400000 IGHV3-13P01766 116 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 IGHV3-7P01780 117 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 RHOUQ7L0Q8 258 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 PLA2G12AQ9BZM1 189 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 EGLN1Q9GZT9 426 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 MED29Q9NX70 200 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 ADAMTS5Q9UNA0 930 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 MEIKINA0A087WXM9 373 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 KIR2DL3P43628 341 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 GNG10P50151 68 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 ADAMTSL4Q6UY14 1074 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 NLRC3Q7RTR2 1065 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 FAM3DQ96BQ1 224 aa12.59□□□□□ -0.39
VAPA-202ENST00000400000 B3GAT1Q9P2W7 334 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms