RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CPOQ8IVL8 374 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PACRGLQ8N7B6 248 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SLC26A10Q8NG04 563 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 OR51L1Q8NGJ5 315 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 C11orf40Q8WZ69 217 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 UBE2FQ969M7 185 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 FBXO17Q96EF6 278 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 HRASLS5Q96KN8 279 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 USB1Q9BQ65 265 aaKnown RBP10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 C1QTNF6Q9BXI9 259 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SIAEQ9HAT2 523 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 EMC7Q9NPA0 242 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 OBP2BQ9NPH6 170 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SMPD3Q9NY59 655 aaPredicted RBP10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 KCNN3Q9UGI6 736 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 NDRG3Q9UGV2 375 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ENOPH1Q9UHY7 261 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 AMDHD2Q9Y303 409 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CELSR2Q9HCU4 2923 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 DPRXA6NFQ7 191 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 IGLV1-44P01699 117 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CELA3BP08861 270 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 OR8G3PP0DMU2 310 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 COX6B1P14854 86 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF3P17036 446 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 NPR2P20594 1047 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 MSR1P21757 451 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF83P51522 516 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 DAZAP2Q15038 168 aaPredicted RBP10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SNAPC1Q16533 368 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SGCAQ16586 387 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 FAM27BQ5VT28 67 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 AADACL4Q5VUY2 407 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 DNM1P34Q6PK57 102 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF584Q8IVC4 421 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 GLB1L2Q8IW92 636 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 LRRC18Q8N456 261 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 TCEANCQ8N8B7 351 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 OR2T4Q8NH00 348 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 RDH12Q96NR8 316 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF416Q9BWM5 594 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 FAM118AQ9NWS6 357 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF226Q9NYT6 803 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CRNNQ9UBG3 495 aaPredicted RBP10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CADP27708 2225 aa10.81□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ASH1LQ9NR48 2969 aaKnown RBP10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 IGHV1-18A0A0C4DH31 117 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 TVP23AA6NH52 213 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PRR23D1E9PI22 279 aaPredicted RBP10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SLC16A6O15403 523 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 IGKV3-15P01624 115 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 HRGP04196 525 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CST2P09228 141 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PRR23D2P0DMB1 279 aaPredicted RBP10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CD79AP11912 226 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CBR1P16152 277 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF14P17017 642 aaPredicted RBP10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 GABRB1P18505 474 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 UBE2NP61088 152 aaKnown RBP10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ADARB1P78563 741 aaKnown RBP10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 HSF2Q03933 536 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PIGFQ07326 219 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SPOCK1Q08629 439 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ALKBH2Q6NS38 261 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 B3GLCTQ6Y288 498 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CXXC5Q7LFL8 322 aaKnown RBP10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SLC16A14Q7RTX9 510 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PROKR2Q8NFJ6 384 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 FAM81AQ8TBF8 368 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 TMEM163Q8TC26 289 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 MUCL1Q96DR8 90 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SLC38A2Q96QD8 506 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 IL4I1Q96RQ9 567 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 C8orf4Q9NR00 106 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 AASSQ9UDR5 926 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ORC6Q9Y5N6 252 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 LHFPL6Q9Y693 200 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 COMMD3-BMI1R4GMX3 469 aa10.8□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ABCA4P78363 2273 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 A6NNC1 897 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 TLX2O43763 284 aaPredicted RBP10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 UBL3O95164 117 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 FARS2O95363 451 aaKnown RBP10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CLIC3O95833 236 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 WNT11O96014 354 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PRF1P14222 555 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF32P17041 273 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 HOXC12P31275 282 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 RPS27P42677 84 aaKnown RBP10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PTDSS1P48651 473 aaKnown RBP10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 RAB1AP62820 205 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 GLO1Q04760 184 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 GSG1Q2KHT4 349 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 NCMAPQ5T1S8 102 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 C1QTNF12Q5T7M4 302 aa10.79□□□□□ -0.68
HLA-DQB1-203ENST00000399082 FBXW10Q5XX13 1052 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms