RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 PPT2Q9UMR5 302 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 SSUH2Q9Y2M2 353 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 FRG2CA6NGY1 282 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 DEGS1O15121 323 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 PRAMEF4O60810 478 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 NXPH2O95156 264 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 NSA2O95478 260 aaKnown RBP7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 SERPINF1P36955 418 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 SNCAP37840 140 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 LIPAP38571 399 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 MCCD1P59942 119 aaPredicted RBP7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 CTU2Q2VPK5 515 aaKnown RBP7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 PXDC1Q5TGL8 231 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 PNPLA1Q8N8W4 532 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 LMNTD1Q8N9Z9 388 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 HLA-CQ95604 372 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 PLK3Q9H4B4 646 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 SLC17A5Q9NRA2 495 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 LIN7CQ9NUP9 197 aaKnown RBP7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 NUMBLQ9Y6R0 609 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 LAMB2P55268 1798 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 ZNF705GA8MUZ8 300 aaPredicted RBP7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 MAOBP27338 520 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 ETV5P41161 510 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 FAM111BQ6SJ93 734 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 VRK3Q8IV63 474 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 EDAQ92838 391 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 PKMYT1Q99640 499 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 TRBV5-4A0A0C4DH59 114 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 ANKRD34BA5PLL1 514 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 CYC1P08574 325 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 OXA1LQ15070 435 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 IAH1Q2TAA2 248 aaPredicted RBP7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 PYCR3Q53H96 274 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 TMEM31Q5JXX7 168 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 ZADH2Q8N4Q0 377 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 PFN4Q8NHR9 129 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 EMG1Q92979 244 aaKnown RBP7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 TEAD3Q99594 435 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 NUDT22Q9BRQ3 303 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 ZPBPQ9BS86 351 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 NKX6-2Q9C056 277 aaPredicted RBP7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 ADAM19Q9H013 955 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 CYB5R1Q9UHQ9 305 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 LAMP3Q9UQV4 416 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 R4GMQ9 66 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 ITGB4P16144 1822 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 DOCK2Q92608 1830 aa7.67□□□□□ -1.18
SPTLC3-201ENST00000399002 CDC14CA4D256 554 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SBK2P0C263 348 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 DIO1P49895 249 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 HCCSP53701 268 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 MRPS34P82930 218 aaKnown RBP7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 HSF1Q00613 529 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SQSTM1Q13501 440 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 TAF9Q16594 264 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 GLYATL3Q5SZD4 288 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SHEQ5VZ18 495 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 ACOT7LQ6ZUV0 252 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SECTM1Q8WVN6 248 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SLC7A6Q92536 515 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 APH1AQ96BI3 265 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 MRPL38Q96DV4 380 aaKnown RBP7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 CIB3Q96Q77 187 aaPredicted RBP7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 USP22Q9UPT9 525 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 DSCR3O14972 297 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 ABHD16AO95870 558 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 PDGFAP04085 211 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 MTHFD2P13995 350 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 TAS2R45P59539 299 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 CDKN3Q16667 212 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 ALKAL2Q6UX46 152 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 C6orf15Q6UXA7 325 aaPredicted RBP7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 CCDC71Q8IV32 467 aaPredicted RBP7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 EGLN1Q9GZT9 426 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 TUBB1Q9H4B7 451 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 ATP13A2Q9NQ11 1180 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 GNG13Q9P2W3 67 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 GNG12Q9UBI6 72 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 DAPP1Q9UN19 280 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SCAND1P57086 179 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SHHQ15465 462 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 MARCH3Q86UD3 253 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 BAHD1Q8TBE0 780 aaPredicted RBP7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 LINC01599Q8WXQ3 324 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 RPL3LQ92901 407 aaKnown RBP7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SLC6A17Q9H1V8 727 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 FBXL2Q9UKC9 423 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 MED16Q9Y2X0 877 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 HCFC2Q9Y5Z7 792 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 LINC01387J3KSC0 135 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 CLN5O75503 358 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 ALX3O95076 343 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 ZDHHC11BP0C7U3 371 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 LIPCP11150 499 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 SPI1P17947 270 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 NME2P22392 152 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 CYB561P49447 251 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 RBP2P50120 134 aa7.66□□□□□ -1.18
SPTLC3-201ENST00000399002 BTN1A1Q13410 526 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms