RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MPZL1O95297 269 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF250P15622 560 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 THBS2P35442 1172 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CBX5P45973 191 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 DHPSP49366 369 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 P2RX1P51575 399 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MESTQ5EB52 335 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 TIGD3Q6B0B8 471 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CHRDL2Q6WN34 429 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MAMSTRQ6ZN01 415 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MRGPREQ86SM8 312 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF595Q8IYB9 648 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PLPP7Q8NBV4 271 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 OR56B4Q8NH76 319 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 GPBAR1Q8TDU6 330 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 FAM71F1Q96KD3 344 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 C1QTNF6Q9BXI9 259 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PRDM9Q9NQV7 894 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 DLL4Q9NR61 685 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 DOCK1Q14185 1865 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MCM3APO60318 1980 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SPTY2D1-AS1A0A0U1RR47 76 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 GPR171O14626 319 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF264O43296 627 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PRAF2O60831 178 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SPDEFO95238 335 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SMIM6P0DI80 62 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 DRD1P21728 446 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 TLE1Q04724 770 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 DLX2Q07687 328 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ACKR1Q16570 336 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 METTL11BQ5VVY1 283 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 KCTD18Q6PI47 426 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 Q6ZN92 141 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CD163Q86VB7 1156 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 DND1Q8IYX4 353 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SLC2A12Q8TD20 617 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ADAMTS18Q8TE60 1221 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 YIPF5Q969M3 257 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MED30Q96HR3 178 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CKLFQ9UBR5 152 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 POMT2Q9UKY4 750 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 NCKAP5O14513 1909 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 C2CD4DB7Z1M9 353 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MT-ATP6P00846 226 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CD2P06729 351 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 AKAIN1P0CW23 69 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 TMIGD3P0DMS9 266 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 OR1D5P58170 312 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 DEFA5Q01523 94 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SGCAQ16586 387 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 C16orf47Q6ZP98 133 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CFAP77Q6ZQR2 320 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CMIPQ8IY22 773 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF101Q8IZC7 436 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SDR16C5Q8N3Y7 309 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 C9orf62Q8N4C0 152 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF615Q8N8J6 731 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 RELL2Q8NC24 303 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MED11Q9P086 117 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MRM2Q9UI43 246 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CCDC163A0A0D9SF12 145 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 C5orf67F2Z3F1 127 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 H3BML4 177 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PGAM2P15259 253 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CXCL3P19876 107 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PRSS3P35030 304 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CSNK1EP49674 416 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 S100A12P80511 92 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MRPS21P82921 87 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 EFNB1P98172 346 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SMCO1Q147U7 214 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 TMUB2Q71RG4 321 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ARIH2OSQ8N7S6 290 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 OR51S1Q8NGJ8 323 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 LCORQ96JN0 433 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 B3GNT2Q9NY97 397 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SPTBN1Q01082 2364 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 A0A087WUJ7 227 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 KANTRA0A1W2PQU2 76 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 METTL21EPA6NDL7 271 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 GATCO43716 136 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 EFNB2P52799 333 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 AANATQ16613 207 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 GSG1Q2KHT4 349 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 COL28A1Q2UY09 1125 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 CDONQ4KMG0 1287 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SLC18B1Q6NT16 456 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 RBM14Q96PK6 669 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 OR1F2PQ96R84 312 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF471Q9BX82 626 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 C2orf42Q9NWW7 574 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SRPK3Q9UPE1 567 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ALPK2Q86TB3 2170 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 BTBD17A6NE02 478 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 AKR1C4P17516 323 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 ACAA2P42765 397 aaKnown RBP4.47□□□□□ -1.69
SMAD4-202ENST00000398417 P2RX3P56373 397 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 SRPXP78539 464 aa4.47□□□□□ -1.69
SMAD4-202ENST00000398417 DMRTC1Q5HYR2 192 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms