RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 C11orf40Q8WZ69 217 aa17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 ISOC1Q96CN7 298 aa17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 SLX1AQ9BQ83 275 aa17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 BCL7BQ9BQE9 202 aa17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 ULBP2Q9BZM5 246 aa17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 NAA50Q9GZZ1 169 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 POLE4Q9NR33 117 aa17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 NDUFB11Q9NX14 153 aa17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 BSNQ9UPA5 3926 aa17.21■□□□□ 0.35
PDLIM2-205ENST00000397761 SPTA1P02549 2419 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 MRPL33O75394 65 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 UPK3AO75631 287 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 ABHD16AO95870 558 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 CD36P16671 472 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 ROM1Q03395 351 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 EGR3Q06889 387 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 TSTQ16762 297 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 ACSF3Q4G176 576 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 KCTD20Q7Z5Y7 419 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 MCEMP1Q8IX19 187 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 PHC2Q8IXK0 858 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 CPT1CQ8TCG5 803 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 RAB2BQ8WUD1 216 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 ASB17Q8WXJ9 295 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 WNT2BQ93097 391 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 GMPPAQ96IJ6 420 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 C4orf36Q96KX1 117 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 SLCO5A1Q9H2Y9 848 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 CALHM2Q9HA72 323 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 RSL24D1Q9UHA3 163 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 CYB5R1Q9UHQ9 305 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 LAMP5Q9UJQ1 280 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 IGSF10Q6WRI0 2623 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 NBEAQ8NFP9 2946 aa17.2■□□□□ 0.34
PDLIM2-205ENST00000397761 TRIM64BA6NI03 449 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 ZNHIT1O43257 154 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 SS18L1O75177 396 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 SULT1C4O75897 302 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 GABARAPO95166 117 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 ZNF823P16415 610 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 AGTR1P30556 359 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 RPS27P42677 84 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 LSM6P62312 80 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 MRPS34P82930 218 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 GPR50Q13585 617 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 SF3B4Q15427 424 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 SLC18B1Q6NT16 456 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 PLEKHG7Q6ZR37 379 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 LINGO2Q7L985 606 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 P2RY8Q86VZ1 359 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 KLBQ86Z14 1044 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 GPR137CQ8N3F9 429 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 ST7LQ8TDW4 575 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 SNX33Q8WV41 574 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 NABP1Q96AH0 204 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 PELI1Q96FA3 418 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 AMELYQ99218 206 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 B3GAT2Q9NPZ5 323 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 TRIM36Q9NQ86 728 aa17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 SPENQ96T58 3664 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-205ENST00000397761 A0A1W2PPL8 197 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 CD8B2A6NJW9 211 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 HSPB2A8KAH6 182 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 RPL36A-HNRNPH2H7BZ11 118 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 SPARCP09486 303 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 EDNRAP25101 427 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 HSPB2Q16082 182 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 CTF1Q16619 201 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 TP53I3Q53FA7 332 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 OTPQ5XKR4 325 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 NSUN5P2Q63ZY6 315 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 CISD2Q8N5K1 135 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 OR5M9Q8NGP3 310 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 RNF166Q96A37 237 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 ZNF837Q96EG3 531 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 OR8B4Q96RC9 309 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 TTYH2Q9BSA4 534 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 ABHD6Q9BV23 337 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 NELFAQ9H3P2 528 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 CRLF2Q9HC73 371 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 GPR35Q9HC97 309 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 MRM2Q9UI43 246 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 CLEC4AQ9UMR7 237 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 LHFPL6Q9Y693 200 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 ATRXP46100 2492 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 RP1L1Q8IWN7 2480 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 J3QLW9 94 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 MAGEB4O15481 346 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 ZNF19P17023 458 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 CDAP32320 146 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 PTGER4P35408 488 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 ZNF84P51523 738 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 TAS2R43P59537 309 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 CCDC58Q4VC31 144 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 TSPO2Q5TGU0 170 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 OR10H5Q8NGA6 315 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 RPS4Y2Q8TD47 263 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 HAVCR2Q8TDQ0 301 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 APH1AQ96BI3 265 aa17.18■□□□□ 0.34
PDLIM2-205ENST00000397761 TRIB1Q96RU8 372 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms