RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CYP4Z1Q86W10 505 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 RBM45Q8IUH3 476 aaKnown RBP13.71□□□□□ -0.21
CUX2-202ENST00000397643 UEVLDQ8IX04 471 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 C10orf67Q8IYJ2 551 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 PAQR4Q8N4S7 273 aaPredicted RBP13.71□□□□□ -0.21
CUX2-202ENST00000397643 LSMEM1Q8N8F7 131 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 C22orf15Q8WYQ4 148 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 SLC38A4Q969I6 547 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 RAB39BQ96DA2 213 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 TXNDC15Q96J42 360 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 SEPHS2Q99611 448 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 FOXB1Q99853 325 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 WFDC6Q9BQY6 131 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 POLR2J2Q9GZM3 115 aaKnown RBP13.71□□□□□ -0.21
CUX2-202ENST00000397643 POLR2J3Q9H1A7 115 aaKnown RBP13.71□□□□□ -0.21
CUX2-202ENST00000397643 MED29Q9NX70 200 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 SELENONQ9NZV5 590 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 TAAR3PQ9P1P4 343 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 FAM32AQ9Y421 112 aaKnown RBP13.71□□□□□ -0.21
CUX2-202ENST00000397643 PPIAL4AQ9Y536 164 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 CACNG2Q9Y698 323 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 TRAV36DV7A0A075B6V5 113 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 A0A087WUJ7 227 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 TCRBV3S1A0A5B6 114 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 RAB36O95755 333 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 PATE4P0C8F1 98 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 ZNF250P15622 560 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 CRYBB2P43320 205 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 CAMK2DQ13557 499 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 OR1Q1Q15612 314 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 NPTX1Q15818 432 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 NKPD1Q17RQ9 610 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 ENTPD8Q5MY95 495 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 DCAF12L2Q5VW00 463 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 C5orf46Q6UWT4 87 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 TREML4Q6UXN2 200 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 GTF3AQ92664 365 aaKnown RBP13.7□□□□□ -0.22
CUX2-202ENST00000397643 C1QTNF5Q9BXJ0 243 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 ULBP2Q9BZM5 246 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 HINT3Q9NQE9 182 aaKnown RBP13.7□□□□□ -0.22
CUX2-202ENST00000397643 DDX28Q9NUL7 540 aaKnown RBP13.7□□□□□ -0.22
CUX2-202ENST00000397643 NKIRAS2Q9NYR9 191 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 AURKCQ9UQB9 309 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 POFUT2Q9Y2G5 429 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 ENPP4Q9Y6X5 453 aa13.7□□□□□ -0.22
CUX2-202ENST00000397643 A0A1B0GWA3 101 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 CPSF4LA6NMK7 179 aaKnown RBP13.69□□□□□ -0.22
CUX2-202ENST00000397643 ANKRD65E5RJM6 399 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 TPST2O60704 377 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 UBL3O95164 117 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 SEMG1P04279 462 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 SERPINA5P05154 406 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 FABP3P05413 133 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 RAP2AP10114 183 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 TAS2R41P59536 307 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 ACTR3P61158 418 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 ERVS71-1P61550 626 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 KPNB1Q14974 876 aaKnown RBP13.69□□□□□ -0.22
CUX2-202ENST00000397643 RGS7BPQ6MZT1 257 aaPredicted RBP13.69□□□□□ -0.22
CUX2-202ENST00000397643 ZNF613Q6PF04 617 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 SKA3Q8IX90 412 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 ADGRG5Q8IZF4 528 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 CANT1Q8WVQ1 401 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 DNAJA4Q8WW22 397 aaPredicted RBP13.69□□□□□ -0.22
CUX2-202ENST00000397643 C7orf34Q96L11 122 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 C1orf147Q96MC9 270 aaPredicted RBP13.69□□□□□ -0.22
CUX2-202ENST00000397643 YY1AP1Q9H869 796 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 NTN4Q9HB63 628 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 IL1RAPQ9NPH3 570 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 B3GAT2Q9NPZ5 323 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 FBXL3Q9UKT7 428 aa13.69□□□□□ -0.22
CUX2-202ENST00000397643 IGHV1-69-2A0A0G2JMI3 117 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 TRAPPC13A5PLN9 417 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 OR5F1O95221 314 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 BGLAPP02818 100 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 FAM157BP0CG42 384 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 RHCEP18577 417 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 GATA3P23771 443 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 ERFP50548 548 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 PCGF3Q3KNV8 242 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 SWT1Q5T5J6 900 aaKnown RBP13.68□□□□□ -0.22
CUX2-202ENST00000397643 ULK3Q6PHR2 472 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 WDR88Q6ZMY6 472 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 PIWIL3Q7Z3Z3 882 aaKnown RBP13.68□□□□□ -0.22
CUX2-202ENST00000397643 ZDHHC21Q8IVQ6 265 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 LRRC17Q8N6Y2 441 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 SIGLECL1Q8N7X8 197 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 SCAIQ8N9R8 606 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 OR6S1Q8NH40 331 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 ADAMTS16Q8TE57 1224 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 PRRC1Q96M27 445 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 MOGAT1Q96PD6 335 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 ZNF347Q96SE7 839 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 C7orf69Q9H7B7 122 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 NDUFAF4Q9P032 175 aa13.68□□□□□ -0.22
CUX2-202ENST00000397643 CLDN25C9JDP6 229 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 LRRN3E7EW58 273 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 THRBP10828 461 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 YAP1P46937 504 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms