RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SPOCK1Q08629 439 aa4.98□□□□□ -1.61
PTPRD-205ENST00000397611 OR52W1Q6IF63 320 aa4.98□□□□□ -1.61
PTPRD-205ENST00000397611 BEND4Q6ZU67 534 aa4.98□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF561Q8N587 486 aa4.98□□□□□ -1.61
PTPRD-205ENST00000397611 OR13C2Q8NGS9 318 aa4.98□□□□□ -1.61
PTPRD-205ENST00000397611 SPACA1Q9HBV2 294 aa4.98□□□□□ -1.61
PTPRD-205ENST00000397611 PNO1Q9NRX1 252 aaKnown RBP4.98□□□□□ -1.61
PTPRD-205ENST00000397611 CHRNA9Q9UGM1 479 aa4.98□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF443Q9Y2A4 671 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-205ENST00000397611 CABIN1Q9Y6J0 2220 aa4.98□□□□□ -1.61
PTPRD-205ENST00000397611 SLC22A23A1A5C7 686 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR6C76A6NM76 312 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CD14P08571 375 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ATF1P18846 271 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 BCL6P41182 706 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SEC13P55735 322 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 KLF9Q13886 244 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ARL6IP1Q15041 203 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 STPG2Q8N412 459 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PLPP5Q8NEB5 264 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 FAM213BQ8TBF2 198 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 MIB2Q96AX9 1013 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SLC35A4Q96G79 324 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 MACROD1Q9BQ69 325 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 GAREM1Q9H706 876 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZFP64Q9NPA5 681 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SLC23A2Q9UGH3 650 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZMIZ1Q9ULJ6 1067 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TBC1D3DA0A087WVF3 549 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TBC1D3IA0A087WXS9 549 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 IGKV1-8A0A0C4DH67 115 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TBC1D3LB9A6J9 549 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 LYPD3O95274 346 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TBC1D3HP0C7X1 549 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 EPHA1P21709 976 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 RIDAP52758 137 aaKnown RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 HSD17B7P56937 341 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SLC25A35Q3KQZ1 300 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ALG10BQ5I7T1 473 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TBC1D3CQ6IPX1 549 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 LRRTM1Q86UE6 522 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TBC1D3Q8IZP1 549 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 LINC00518Q8N0U6 118 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF619Q8N2I2 560 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 BVESQ8NE79 360 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR4K17Q8NGC6 315 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR5M1Q8NGP8 315 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PHYHIPLQ96FC7 376 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF251Q9BRH9 671 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 G6PC3Q9BUM1 346 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 IL23AQ9NPF7 189 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 NPDC1Q9NQX5 325 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CPNE7Q9UBL6 633 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PRODH2Q9UF12 536 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 NUDT19A8MXV4 375 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 P2RX6O15547 441 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TIMP1P01033 207 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TBPP20226 339 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 KCNJ3P48549 501 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SSTP61278 116 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CRMP1Q14194 572 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 INSL4Q14641 139 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 STEAP1BQ6NZ63 245 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR13C9Q8NGT0 318 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 NPRL2Q8WTW4 380 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TMEM255BQ8WV15 326 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SENP5Q96HI0 755 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ASB16Q96NS5 453 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZFYVE21Q9BQ24 234 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 EXOSC3Q9NQT5 275 aaKnown RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 FBXL4Q9UKA2 621 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 GAB2Q9UQC2 676 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 UBE2J1Q9Y385 318 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 UMAD1C9J7I0 102 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 DCTN6O00399 190 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SOX1O00570 391 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR2T1O43869 369 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 NDUFB6O95139 128 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 NR2C1P13056 603 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SERPINA2P20848 420 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TOMM34Q15785 309 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CST6Q15828 149 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TCTN1Q2MV58 587 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SLC36A2Q495M3 483 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 C4orf17Q53FE4 359 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 FHL5Q5TD97 284 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 HSD17B11Q8NBQ5 300 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 BBS1Q8NFJ9 593 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SLC41A2Q96JW4 573 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF587Q96SQ5 575 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SAMD10Q9BYL1 202 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF281Q9Y2X9 895 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR6C6A6NF89 314 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CDC42EP2O14613 210 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PHOX2AO14813 284 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 BCL2L11O43521 198 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CRTAPO75718 401 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SLC2A10O95528 541 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 MPIG6BO95866 241 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 WNT1P04628 370 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms