RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MARCH7Q9H992 704 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 RHBDL2Q9NX52 303 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 CAMK2AQ9UQM7 478 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 KIAA1549Q9HCM3 1950 aa13.27□□□□□ -0.28
CAPN3-207ENST00000397200 OR14I1A6ND48 311 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 FTCDNL1E5RQL4 147 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 NPIPA2E9PIF3 369 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 NPIPA3F8WFD2 350 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 F13BP05160 661 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 CPN1P15169 458 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 PTBP1P26599 531 aaKnown RBP eCLIP13.27□□□□□ -0.29
CAPN3-207ENST00000397200 EIF1AXP47813 144 aaKnown RBP13.27□□□□□ -0.29
CAPN3-207ENST00000397200 TDGF1P3P51864 188 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 GBX2P52951 348 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-207ENST00000397200 HCCSP53701 268 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 CAV3P56539 151 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 CARD18P57730 90 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 SLC35A1P78382 337 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 RIN1Q13671 783 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 TP53I3Q53FA7 332 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 EEF1A1P5Q5VTE0 462 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 RPL22L1Q6P5R6 122 aaKnown RBP13.27□□□□□ -0.29
CAPN3-207ENST00000397200 XKRXQ6PP77 449 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 METAP1DQ6UB28 335 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-207ENST00000397200 TPRA1Q86W33 373 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 TIGD4Q8IY51 512 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 POC5Q8NA72 575 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 OR10D3Q8NH80 312 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 ABHD4Q8TB40 342 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF519Q8TB69 540 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 ACOT12Q8WYK0 555 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 WDYHV1Q96HA8 205 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 ADGRG7Q96K78 797 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 NEURL2Q9BR09 285 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 PPIL3Q9H2H8 161 aaKnown RBP13.27□□□□□ -0.29
CAPN3-207ENST00000397200 TIGARQ9NQ88 270 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 RPRD1BQ9NQG5 326 aaKnown RBP13.27□□□□□ -0.29
CAPN3-207ENST00000397200 ALKBH4Q9NXW9 302 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 GRHPRQ9UBQ7 328 aa13.27□□□□□ -0.29
CAPN3-207ENST00000397200 PRRC2CQ9Y520 2896 aaKnown RBP13.26□□□□□ -0.29
CAPN3-207ENST00000397200 SVILO95425 2214 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 EPG5Q9HCE0 2579 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 GRPRP30550 384 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 PYCR1P32322 319 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 CLDN15P56746 228 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 DEFA1P59665 94 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 DEFA3P59666 94 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 SLC3A1Q07837 685 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 C3AR1Q16581 482 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 RPTNQ6XPR3 784 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 CHMP1BQ7LBR1 199 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 NR2C2APQ86WQ0 139 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 PM20D2Q8IYS1 436 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 GDPD1Q8N9F7 314 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 OR6K6Q8NGW6 343 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 OR2T4Q8NH00 348 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 HAVCR2Q8TDQ0 301 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 RNF166Q96A37 237 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-207ENST00000397200 KCTD12Q96CX2 325 aaKnown RBP13.26□□□□□ -0.29
CAPN3-207ENST00000397200 MNTQ99583 582 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 PRDM14Q9GZV8 571 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 PAQR5Q9NXK6 330 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-207ENST00000397200 MRPL39Q9NYK5 338 aaKnown RBP13.26□□□□□ -0.29
CAPN3-207ENST00000397200 GRIP1Q9Y3R0 1128 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 SPENQ96T58 3664 aaKnown RBP13.26□□□□□ -0.29
CAPN3-207ENST00000397200 SPTA1P02549 2419 aa13.26□□□□□ -0.29
CAPN3-207ENST00000397200 A0A0G2JK05 382 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 SMIM30A4D0T7 59 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 DNPH1O43598 174 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 CXCL13O43927 109 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 GPRIN2O60269 458 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 RENP00797 406 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 SERPINA3P01011 423 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 PTGS2P35354 604 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 GDI2P50395 445 aaKnown RBP13.25□□□□□ -0.29
CAPN3-207ENST00000397200 RAC3P60763 192 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 RPS11P62280 158 aaKnown RBP eCLIP13.25□□□□□ -0.29
CAPN3-207ENST00000397200 SIRPAP78324 504 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 ZMAT1Q5H9K5 638 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 LYPD4Q6UWN0 246 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 PAMR1Q6UXH9 720 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 GFRALQ6UXV0 394 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 CDC20BQ86Y33 519 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF417Q8TAU3 575 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 CPT1CQ8TCG5 803 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 GHSRQ92847 366 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF587Q96SQ5 575 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-207ENST00000397200 TTYH2Q9BSA4 534 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 INIPQ9NRY2 104 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF346Q9UL40 294 aaKnown RBP13.25□□□□□ -0.29
CAPN3-207ENST00000397200 TBC1D24Q9ULP9 559 aa13.25□□□□□ -0.29
CAPN3-207ENST00000397200 TRAV1-2A0A0B4J238 106 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ANKRD61A6NGH8 418 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 NPIPB13A6NJU9 1138 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 PRR32B1ATL7 298 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 NPIPB4C9JG80 1138 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 DCTN6O00399 190 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 ZNHIT1O43257 154 aa13.24□□□□□ -0.29
CAPN3-207ENST00000397200 EIF1BO60739 113 aaKnown RBP13.24□□□□□ -0.29
CAPN3-207ENST00000397200 NCR1O76036 304 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms