RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 RAB40AQ8WXH6 277 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 MCHR2Q969V1 340 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 CLEC4MQ9H2X3 399 aaPredicted RBP12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF304Q9HCX3 659 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 TMEM272A0A1B0GTI8 110 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 PLSCR5A0PG75 271 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 OR2M5A3KFT3 312 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 CPED1A4D0V7 1026 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 LIPCP11150 499 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF35P13682 527 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 APEHP13798 732 aaKnown RBP12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 IL12BP29460 328 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 ARPC4P59998 168 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC17A1Q14916 467 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 NSDHLQ15738 373 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF626Q68DY1 528 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 NDUFAF7Q7L592 441 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 CDH24Q86UP0 819 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 ANGPTL6Q8NI99 470 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 TTC9Q92623 222 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 CXorf58Q96LI9 332 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 CMTM3Q96MX0 182 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 COMMD4Q9H0A8 199 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 TAS2R4Q9NYW5 299 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 IGKV3D-11A0A0A0MRZ8 115 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 M0QYG6 137 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 XRCC3O43542 346 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 SUSD5O60279 629 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 OPN1LWP04000 364 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 GTF2F2P13984 249 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ARRB1P49407 418 aaPredicted RBP12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 MOGAT2Q3SYC2 334 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 CORO6Q6QEF8 472 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC36A1Q7Z2H8 476 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF227Q86WZ6 799 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 MUC20Q8N307 709 aaPredicted RBP12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF417Q8TAU3 575 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 DUSP19Q8WTR2 217 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 OMA1Q96E52 524 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 MED30Q96HR3 178 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC46A1Q96NT5 459 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF587Q96SQ5 575 aaPredicted RBP12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 PELOQ9BRX2 385 aaKnown RBP12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 LAT2Q9GZY6 243 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 CTSFQ9UBX1 484 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 MKL2Q9ULH7 1088 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 AUP1Q9Y679 476 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 DCDC2BA2VCK2 349 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 PRSS37A4D1T9 235 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 FRG2CA6NGY1 282 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 H7C417 338 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ARPC5O15511 151 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 CREBL2O60519 120 aaPredicted RBP12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 RBBP9O75884 186 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 IFNGR1P15260 489 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 AP3S2P59780 193 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ADAM8P78325 824 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 PLCXD2Q0VAA5 305 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 AANATQ16613 207 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 LYSMD4Q5XG99 296 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ALKAL2Q6UX46 152 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 C17orf107Q6ZR85 190 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 KCTD20Q7Z5Y7 419 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ADGRG3Q86Y34 549 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 FAM3DQ96BQ1 224 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC41A2Q96JW4 573 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 OR8B4Q96RC9 309 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ATG5Q9H1Y0 275 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF224Q9NZL3 707 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 MTFP1Q9UDX5 166 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 COA3Q9Y2R0 106 aaPredicted RBP12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 MMACHCQ9Y4U1 282 aa12.11□□□□□ -0.47
GTF2F1-201ENST00000394456 TMED7-TICAM2A0A0A6YYA0 188 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 IGLV1-36A0A0B4J1U3 117 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 TMEM212A6NML5 194 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 XKRYO14609 159 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 GOSR2O14653 212 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ABCD3P28288 659 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 SPOCK1Q08629 439 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 BIKQ13323 160 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 GUSBP11Q6P575 273 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ANKRD16Q6P6B7 361 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 TMEM65Q6PI78 240 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 GLRX5Q86SX6 157 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 LRRC20Q8TCA0 184 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 C8orf44Q96CB5 159 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF501Q96CX3 271 aaPredicted RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 ARL5BQ96KC2 179 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 TBL1XR1Q9BZK7 514 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 EXOSC3Q9NQT5 275 aaKnown RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 TMED7Q9Y3B3 224 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 MRPS18BQ9Y676 258 aaKnown RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 FREM2Q5SZK8 3169 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 CNTRLQ7Z7A1 2325 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 A0A1W2PPL8 197 aa12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 EIF1AYO14602 144 aaKnown RBP12.1□□□□□ -0.47
GTF2F1-201ENST00000394456 SULT1B1O43704 296 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms