RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CPEB3Q8NE35 698 aaKnown RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC30A7Q8NEW0 376 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SDR9C7Q8NEX9 313 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 NUP37Q8NFH4 326 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR4F15Q8NGB8 312 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR8D4Q8NGM9 314 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR2T29Q8NH02 315 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR4K13Q8NH42 304 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 GNPDA2Q8TDQ7 276 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 TRMT61AQ96FX7 289 aaKnown RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SORCS2Q96PQ0 1159 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 GPX7Q96SL4 187 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SYT3Q9BQG1 590 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 IFT27Q9BW83 186 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF416Q9BWM5 594 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 CHID1Q9BWS9 393 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 MRPL37Q9BZE1 423 aaKnown RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 TRIM15Q9C019 465 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 NUAK2Q9H093 628 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 REEP1Q9H902 201 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SIAEQ9HAT2 523 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SMURF2Q9HAU4 748 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 MYEF2Q9P2K5 600 aaKnown RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC7A8Q9UHI5 535 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 POMPQ9Y244 141 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 COA3Q9Y2R0 106 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SAMHD1Q9Y3Z3 626 aaKnown RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 F8P00451 2351 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 ROS1P08922 2347 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 IGHV4-30-2A0A087WSY4 118 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 TMEM129A0AVI4 362 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 FAM171A2A8MVW0 826 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 RNF223E7ERA6 249 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 KRT36O76013 467 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 TXNDC12O95881 172 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 HIST1H1CP16403 213 aaKnown RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 NPR2P20594 1047 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC6A6P31641 620 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 IFNGR2P38484 337 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 CENPAP49450 140 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 RPS6KA3P51812 740 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 HMGA2P52926 109 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 NUDT6P53370 316 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 SNRPD2P62316 118 aaKnown RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 PSG4Q00888 419 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 GALK2Q01415 458 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 TRAP1Q12931 704 aaKnown RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 TSPAN31Q12999 210 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 TNK1Q13470 666 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 ENDOGQ14249 297 aaKnown RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 MAD2L1BPQ15013 274 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 MICAQ29983 383 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 ALKBH6Q3KRA9 238 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 FAM27BQ5VT28 67 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF774Q6NX45 483 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 PRSS57Q6UWY2 283 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 FOXL2NBQ6ZUU3 175 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 ICA1LQ8NDH6 482 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR10G2Q8NGC3 310 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLCO4A1Q96BD0 722 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 NMNAT3Q96T66 252 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 VRK1Q99986 396 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 NIPSNAP1Q9BPW8 284 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR2H1Q9GZK4 316 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 NDEL1Q9GZM8 345 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 WNT5BQ9H1J7 359 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 TPK1Q9H3S4 243 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 PLK3Q9H4B4 646 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 CDH20Q9HBT6 801 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 MOV10Q9HCE1 1003 aaKnown RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 CCNB1IP1Q9NPC3 277 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 POLE4Q9NR33 117 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 ARMC1Q9NVT9 282 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 VSX1Q9NZR4 365 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 CDH10Q9Y6N8 788 aa6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 FLNAP21333 2647 aaKnown RBP6.61□□□□□ -1.35
HMGB3P1-201ENST00000393368 NF1P21359 2839 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 CADP27708 2225 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 LOC100509620A0A075B734 347 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 IQCMA0A1B0GVH7 501 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 TCRBV3S1A0A5B6 114 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 C5orf49A4QMS7 147 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR6C68A6NDL8 312 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 AQP12BA6NM10 295 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 B9A039 149 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 H7C417 338 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 TMCC2O75069 709 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 FKBP6O75344 327 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 KHDRBS3O75525 346 aaKnown RBP6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 CLPTM1O96005 669 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 CST1P01037 141 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 TP53P04637 393 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 LCKP06239 509 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 ADRA2AP08913 450 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 CST2P09228 141 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 INHBBP09529 407 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 NR2C1P13056 603 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 MSR1P21757 451 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 PAX7P23759 505 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 STOMP27105 288 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms