RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 IFNL4K9M1U5 179 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 PRB2P02812 416 aaPredicted RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 AMY1AP04745 511 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 VIMP08670 466 aaKnown RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 NR2F1P10589 423 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 B4GALT1P15291 398 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 ECHS1P30084 290 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 CCT5P48643 541 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 HBA1P69905 142 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 HSF2Q03933 536 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 PAX8Q06710 450 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 MAPK14Q16539 360 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 DEFB112Q30KQ8 113 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 SLC36A2Q495M3 483 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 NRN1LQ496H8 165 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 ANXA8L1Q5VT79 327 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 AP1ARQ63HQ0 302 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 TYW3Q6IPR3 259 aaKnown RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 TNFAIP8L2Q6P589 184 aaPredicted RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 ARL9Q6T311 187 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 Q6YL49 198 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 H1FNTQ75WM6 255 aaPredicted RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 LINGO2Q7L985 606 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 RNF130Q86XS8 419 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 KDM8Q8N371 416 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 TRIML2Q8N7C3 387 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 SCAIQ8N9R8 606 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 FNDC5Q8NAU1 212 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 ACMSDQ8TDX5 336 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 CNOT9Q92600 299 aaKnown RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 TAF15Q92804 592 aaKnown RBP eCLIP6.61□□□□□ -1.35
CASP4-201ENST00000393150 COQ8BQ96D53 544 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 NEURL3Q96EH8 262 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 KTI12Q96EK9 354 aaPredicted RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 FCRL1Q96LA6 429 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 WWC2-AS2Q96NR7 200 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 SSBP3Q9BWW4 388 aaPredicted RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 GATA5Q9BWX5 397 aaPredicted RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 CHIAQ9BZP6 476 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 TRIM15Q9C019 465 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 FAM107BQ9H098 131 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 CENPHQ9H3R5 247 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 VIPAS39Q9H9C1 493 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 KCNE5Q9UJ90 142 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 RAB21Q9UL25 225 aa6.61□□□□□ -1.35
CASP4-201ENST00000393150 CAB39Q9Y376 341 aaPredicted RBP6.61□□□□□ -1.35
CASP4-201ENST00000393150 NUP214P35658 2090 aaPredicted RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 IGLV3-9A0A075B6K5 115 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 ERICH4A6NGS2 130 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 TRAPPC2LH3BP13 241 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 AP3D1O14617 1153 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 LSM1O15116 133 aaKnown RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 FRS3O43559 492 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 OR6A2O95222 327 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 CLPTM1O96005 669 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 GASTP01350 101 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 IGHV3-13P01766 116 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 SBK3P0C264 359 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 IGHV4-38-2P0DP08 117 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 PNMTP11086 282 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 MAKP20794 623 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 CCNOP22674 350 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 MDH2P40926 338 aaKnown RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 RPS5P46782 204 aaKnown RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 DNAJB13P59910 316 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 TNFAIP6P98066 277 aaPredicted RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 EPS8Q12929 822 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 BNIP2Q12982 314 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 CCDC153Q494R4 210 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 LIN52Q52LA3 116 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 MRPL2Q5T653 305 aaKnown RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 KPRPQ5T749 579 aaPredicted RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 CLEC6AQ6EIG7 209 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 DHRS7BQ6IAN0 325 aaPredicted RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 WDR93Q6P2C0 686 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 C6orf89Q6UWU4 347 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 ZYG11AQ6WRX3 759 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 TIFABQ6ZNK6 161 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 ZCCHC23Q6ZST2 131 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 OVCH2Q7RTZ1 564 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 C20orf196Q8IYI0 205 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 GALNT4Q8N4A0 578 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 SPERTQ8NA61 448 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 SPATA4Q8NEY3 305 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 OR1J1Q8NGS3 322 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 LINC01006Q8NI28 216 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 PPP1R35Q8TAP8 253 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 MIPOL1Q8TD10 442 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 RAB40AQ8WXH6 277 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 SLC38A4Q969I6 547 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 RAB24Q969Q5 203 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 UPRTQ96BW1 309 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 NEIL1Q96FI4 390 aaPredicted RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 TRNT1Q96Q11 434 aaKnown RBP6.6□□□□□ -1.35
CASP4-201ENST00000393150 OR2M2Q96R28 347 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 EPYCQ99645 322 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 MECRQ9BV79 373 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 PARD6BQ9BYG5 372 aa6.6□□□□□ -1.35
CASP4-201ENST00000393150 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms