RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 MFNGO00587 321 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 PRKAB2O43741 272 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 TM7SF2O76062 418 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 IGHV2-5P01817 119 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 FGF1P05230 155 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 HTR2AP28223 471 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 OPRD1P41143 372 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 PRLHRP49683 370 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 ZNF83P51522 516 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 MPV17L2Q567V2 206 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 METTL21CQ5VZV1 264 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 ZFAND6Q6FIF0 208 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 MRGPRFQ96AM1 343 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 CSPG4P5Q96PW8 444 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 FAM49BQ9NUQ9 324 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 CHMP2BQ9UQN3 213 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 TRIP11Q15643 1979 aa0.23□□□□□ -2.37
RNU6-1009P-201ENST00000390996 MUC5BQ9HC84 5762 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 CHST10O43529 356 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 TNNI3P19429 210 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 NTF3P20783 257 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 SLC2A5P22732 501 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 MPV17P39210 176 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 CDKN1BP46527 198 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 UGT2B15P54855 530 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 NUCB2P80303 420 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 ZSCAN26Q16670 478 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 TEX30Q5JUR7 227 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 AVPI1Q5T686 147 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 TBPL2Q6SJ96 375 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 SNX20Q7Z614 316 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 ZNF502Q8TBZ5 544 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 C4orf36Q96KX1 117 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 CLCC1Q96S66 551 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 TCHPQ9BT92 498 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 C1orf50Q9BV19 199 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 THAP9Q9H5L6 903 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 LINC00574Q9H8X3 128 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 POLDIP2Q9Y2S7 368 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 MEMO1Q9Y316 297 aa0.22□□□□□ -2.37
RNU6-1009P-201ENST00000390996 HLA-DPA1P20036 260 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CSRP1P21291 193 aaKnown RBP0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 HMGB2P26583 209 aaKnown RBP0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 GNA11P29992 359 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 FDFT1P37268 417 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 PPIL2Q13356 520 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 DGUOKQ16854 277 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 DMRTC1Q5HYR2 192 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TMEM69Q5SWH9 247 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 PYHIN1Q6K0P9 492 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TMEM135Q86UB9 458 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ECHDC2Q86YB7 292 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TMEM25Q86YD3 366 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CCDC50Q8IVM0 306 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 SEH1LQ96EE3 360 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 OR8B4Q96RC9 309 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 SORT1Q99523 831 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 OMDQ99983 421 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ELOVL3Q9HB03 270 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 YARS2Q9Y2Z4 477 aaKnown RBP0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 OR10H1Q9Y4A9 318 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TIMM10BQ9Y5J6 103 aa0.21□□□□□ -2.38
RNU6-1009P-201ENST00000390996 AHNAKQ09666 5890 aaKnown RBP0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 RAMP3O60896 148 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 DIRAS1O95057 198 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CBR1P16152 277 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 GALR1P47211 349 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 NUTF2P61970 127 aaKnown RBP0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CDH17Q12864 832 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 KCTD21Q4G0X4 260 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ANKRD22Q5VYY1 191 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 MED27Q6P2C8 311 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 NUDCD3Q8IVD9 361 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 OR10J6PQ8NGY7 276 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 OSTF1Q92882 214 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 RBBP8Q99708 897 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 KCTD14Q9BQ13 255 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 RSG1Q9BU20 258 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 UFSP2Q9NUQ7 469 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ASF1BQ9NVP2 202 aa0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CGNQ9P2M7 1197 aaKnown RBP0.2□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CDHR2Q9BYE9 1310 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 IGHV3-72A0A0B4J1Y9 119 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 MED7O43513 233 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TOM1O60784 492 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 LCA5LO95447 670 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 FSTL3O95633 263 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 PTBP3O95758 552 aaKnown RBP0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 IGLV7-43P04211 117 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CCNG1P51959 295 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CCNA1P78396 465 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CDK5Q00535 292 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CDK16Q00536 496 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 FMODQ06828 376 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ARHGAP19Q14CB8 494 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 SLC9A3R2Q15599 337 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 SFT2D3Q587I9 215 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 THEM4Q5T1C6 240 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 PRSS54Q6PEW0 395 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms