RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 PAQR8Q8TEZ7 354 aa12.53□□□□□ -0.4
SNCAIP-203ENST00000379538 NR4A3Q92570 626 aa12.53□□□□□ -0.4
SNCAIP-203ENST00000379538 TINAGL1Q9GZM7 467 aaPredicted RBP12.53□□□□□ -0.4
SNCAIP-203ENST00000379538 STEAP1Q9UHE8 339 aa12.53□□□□□ -0.4
SNCAIP-203ENST00000379538 FAM96BQ9Y3D0 163 aa12.53□□□□□ -0.4
SNCAIP-203ENST00000379538 CPED1A4D0V7 1026 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 RNF222A6NCQ9 220 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 ALOX12BO75342 701 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 GPANK1O95872 356 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 H2AFB1P0C5Y9 115 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 OR4E1P0C645 316 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 AKR1C3P42330 323 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 FOXL2P58012 376 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 BLOC1S1P78537 153 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 PON3Q15166 354 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 SWI5Q1ZZU3 235 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 PRAMEF8Q5VWM4 474 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 PRAMEF7Q5VXH5 474 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 RAB12Q6IQ22 244 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 TMPRSS9Q7Z410 1059 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 GALNT16Q8N428 558 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 SFT2D1Q8WV19 159 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 RELTQ969Z4 430 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 C3orf49Q96BT1 292 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 ZNF764Q96H86 408 aaPredicted RBP12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 LMF1Q96S06 567 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 SLC19A3Q9BZV2 496 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 HAO2Q9NYQ3 351 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 ATXN7L1Q9ULK2 861 aaPredicted RBP12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 FARSAQ9Y285 508 aaKnown RBP12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 PLEKHA6Q9Y2H5 1048 aa12.52□□□□□ -0.4
SNCAIP-203ENST00000379538 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 APOC1P02654 83 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 TRA2BP62995 288 aaKnown RBP12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 HLA-BQ31612 363 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 H3F3CQ6NXT2 135 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 OOSP2Q86WS3 158 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 MFSD9Q8NBP5 474 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 OR6N1Q8NGY5 312 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 ELF4Q99607 663 aaPredicted RBP12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 PDCD10Q9BUL8 212 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 FRRS1LQ9P0K9 344 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 PILRAQ9UKJ1 303 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 KCNK7Q9Y2U2 307 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 HEATR5AQ86XA9 2040 aa12.52□□□□□ -0.41
SNCAIP-203ENST00000379538 KANTRA0A1W2PQU2 76 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 SGCEO43556 437 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 NDUFS6O75380 124 aaKnown RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ITGA10O75578 1167 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RD3LP0DJH9 198 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 CAPZA1P52907 286 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ACTA2P62736 377 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ACTG2P63267 376 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 DUSP8Q13202 625 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RBM39Q14498 530 aaKnown RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 SCGB2B2Q4G0G5 96 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RHOUQ7L0Q8 258 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 SYS1Q8N2H4 156 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 OR2L5Q8NG80 312 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 BAHD1Q8TBE0 780 aaPredicted RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 PPP1R14AQ96A00 147 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 CACYBPQ9HB71 228 aaKnown RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 PILRBQ9UKJ0 227 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ICAM5Q9UMF0 924 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 KNTC1P50748 2209 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 TVP23AA6NH52 213 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RHPN2P1A8MT19 583 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 F5H0A9 414 aaPredicted RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 H7C1C5 153 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 DOK2O60496 412 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ANXA2P07355 339 aaKnown RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 UBBP0CG47 229 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 UBCP0CG48 685 aaKnown RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RFC3P40938 356 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 PTGFRP43088 359 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 LCN6P62502 163 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RPS27AP62979 156 aaKnown RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 UBA52P62987 128 aaKnown RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 SNTB1Q13884 538 aaKnown RBP12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ERV3-1Q14264 604 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ARHGAP11BQ3KRB8 267 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 DCST2Q5T1A1 773 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 LIPNQ5VXI9 398 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ARMC6Q6NXE6 501 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RCBTB1Q8NDN9 531 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 PPP1R1CQ8WVI7 109 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 RAB40AQ8WXH6 277 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 SLC22A18Q96BI1 424 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 C10orf90Q96M02 699 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 FOXN4Q96NZ1 517 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 ZFYVE21Q9BQ24 234 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 CHRNA9Q9UGM1 479 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 MKL2Q9ULH7 1088 aa12.51□□□□□ -0.41
SNCAIP-203ENST00000379538 CNOT1A5YKK6 2376 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms