RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 OR51S1Q8NGJ8 323 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 MMABQ96EY8 250 aaPredicted RBP8.09□□□□□ -1.11
LIG3-202ENST00000378526 SHARPINQ9H0F6 387 aa8.09□□□□□ -1.11
LIG3-202ENST00000378526 A0A1W2PPH5 198 aa8.09□□□□□ -1.12
LIG3-202ENST00000378526 SPATA31C2B4DYI2 1134 aa8.09□□□□□ -1.12
LIG3-202ENST00000378526 M0R3E3 92 aa8.09□□□□□ -1.12
LIG3-202ENST00000378526 LIMS3P0CW19 117 aa8.09□□□□□ -1.12
LIG3-202ENST00000378526 LIMS4P0CW20 117 aa8.09□□□□□ -1.12
LIG3-202ENST00000378526 TYRP1P17643 537 aa8.09□□□□□ -1.12
LIG3-202ENST00000378526 CTF1Q16619 201 aa8.09□□□□□ -1.12
LIG3-202ENST00000378526 EMG1Q92979 244 aaKnown RBP8.09□□□□□ -1.12
LIG3-202ENST00000378526 TMEM19Q96HH6 336 aa8.09□□□□□ -1.12
LIG3-202ENST00000378526 A0A1B0GTW7 788 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 CORTO00230 105 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 TNFRSF10CO14798 259 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 FZD6O60353 706 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 EPHX1P07099 455 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ZNF28P17035 718 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 CD226Q15762 336 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ZNF468Q5VIY5 522 aaPredicted RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 ZNF813Q6ZN06 617 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ZNF765Q7L2R6 523 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ABHD4Q8TB40 342 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SNX22Q96L94 193 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 PRTFDC1Q9NRG1 225 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 MROH2AA6NES4 1674 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 OR2W5A6NFC9 320 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 CYC1P08574 325 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 PLCXD2Q0VAA5 305 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SMAGPQ0VAQ4 97 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 TBPL2Q6SJ96 375 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 LCN15Q6UWW0 184 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 KMT5CQ86Y97 462 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 DLL4Q9NR61 685 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 B3GAT1Q9P2W7 334 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 EFCAB6Q5THR3 1501 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 DNAJC13O75165 2243 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 OR2T8A6NH00 312 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 FAM163BP0C2L3 166 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 OR1D4P47884 311 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 METAP1P53582 386 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 LKAAEAR1Q8TD35 194 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SLC6A18Q96N87 628 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SETBP1Q9Y6X0 1596 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ABCC6O95255 1503 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 FAM3BP58499 235 aaPredicted RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 FAM3DQ96BQ1 224 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 NECTIN4Q96NY8 510 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 PDCD2LQ9BRP1 358 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 BOCQ9BWV1 1114 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 PARP12Q9H0J9 701 aaKnown RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 NOX4Q9NPH5 578 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 WSB1Q9Y6I7 421 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 CCL15-CCL14A0A0B4J2E2 113 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 GLRA1P23415 457 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SCN5AQ14524 2016 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 RGNQ15493 299 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 TARBP2Q15633 366 aaKnown RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 CLEC10AQ8IUN9 316 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 NLGN4XQ8N0W4 816 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 OR52N1Q8NH53 320 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 C2orf50Q96LR7 162 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 UTP23Q9BRU9 249 aaKnown RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 B4GALT2O60909 372 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 CBX7O95931 251 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 LIPFP07098 398 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SLC35E2BP0CK96 405 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 EPXP11678 715 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ZNF140P52738 457 aaPredicted RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 RAG2P55895 527 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 MTCP1P56278 107 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ALKBH1Q13686 389 aaKnown RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 PARM1Q6UWI2 310 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 CYHR1Q6ZMK1 362 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 GPR32P1Q8NGA4 272 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 OR6C1Q96RD1 312 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SLC30A3Q99726 388 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 ACER3Q9NUN7 267 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 TDRD6O60522 2096 aaKnown RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 HMSDA8MTL9 139 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 H7C1C5 153 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 CCL22O00626 93 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 AKR7A2O43488 359 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 NEURL1O76050 574 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 CTSLP07711 333 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 C8orf89P0DMQ9 161 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SLC25A4P12235 298 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 BLVRBP30043 206 aaPredicted RBP8.08□□□□□ -1.12
LIG3-202ENST00000378526 VIPR2P41587 438 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 DHODHQ02127 395 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 TGFBR3Q03167 851 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 TAF10Q12962 218 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 LY6KQ17RY6 165 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 FAM71E1Q6IPT2 247 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 TIMP4Q99727 224 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 SELENOIQ9C0D9 397 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms