RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 ADAD1Q96M93 576 aaKnown RBP12.48□□□□□ -0.41
TPM2-204ENST00000378300 CDCA4Q9BXL8 241 aa12.48□□□□□ -0.41
TPM2-204ENST00000378300 CALHM2Q9HA72 323 aa12.48□□□□□ -0.41
TPM2-204ENST00000378300 MRPS18AQ9NVS2 196 aaKnown RBP12.48□□□□□ -0.41
TPM2-204ENST00000378300 KLHL9Q9P2J3 617 aa12.48□□□□□ -0.41
TPM2-204ENST00000378300 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
TPM2-204ENST00000378300 SELENOFO60613 162 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 MPZL1O95297 269 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 TPOP07202 933 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 TGFBR1P36897 503 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
TPM2-204ENST00000378300 RGS6P49758 472 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 RAB40BQ12829 278 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
TPM2-204ENST00000378300 RPTNQ6XPR3 784 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 C3P1Q6ZMU1 363 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 AAED1Q7RTV5 226 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 PARP16Q8N5Y8 322 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 HTRA1Q92743 480 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 MCHR2Q969V1 340 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 RNF122Q9H9V4 155 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 BCO1Q9HAY6 547 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 CLEC2DQ9UHP7 191 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 FOXD3Q9UJU5 478 aaPredicted RBP12.47□□□□□ -0.41
TPM2-204ENST00000378300 EXOGQ9Y2C4 368 aaKnown RBP12.47□□□□□ -0.41
TPM2-204ENST00000378300 ZNF175Q9Y473 711 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 FKBP7Q9Y680 259 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 MED12LQ86YW9 2145 aa12.47□□□□□ -0.41
TPM2-204ENST00000378300 SPTA1P02549 2419 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 A0A075B6Q4 140 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 TTLL8A6PVC2 850 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 ERVH48-1M5A8F1 160 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 RGS13O14921 159 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 UPK3AO75631 287 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 IGHV3-9P01782 118 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 APOA1P02647 267 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 TFP02787 698 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 QDPRP09417 244 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 SBK2P0C263 348 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 PSKH1P11801 424 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 ATP6V1E1P36543 226 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 CENPAP49450 140 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 DOC2BQ14184 412 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 RNPS1Q15287 305 aaKnown RBP12.46□□□□□ -0.41
TPM2-204ENST00000378300 MEP1BQ16820 701 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 KLHL22Q53GT1 634 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 ARMCX4Q5H9R4 360 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 SLC35D3Q5M8T2 416 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 SPANXN2Q5MJ10 180 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 NUFIP2Q7Z417 695 aaKnown RBP12.46□□□□□ -0.41
TPM2-204ENST00000378300 CD163Q86VB7 1156 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 MCEMP1Q8IX19 187 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 GCNT2Q8N0V5 402 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 RFLNBQ8N5W9 214 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 OR6N1Q8NGY5 312 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 SETD6Q8TBK2 473 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 TMEM54Q969K7 222 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 ZNF837Q96EG3 531 aaPredicted RBP12.46□□□□□ -0.41
TPM2-204ENST00000378300 TMEM80Q96HE8 168 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 RBP7Q96R05 134 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 TBX5Q99593 518 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 WDR76Q9H967 626 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 SIAEQ9HAT2 523 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 HAO2Q9NYQ3 351 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 GLTPQ9NZD2 209 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 CRNNQ9UBG3 495 aaPredicted RBP12.46□□□□□ -0.41
TPM2-204ENST00000378300 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.41
TPM2-204ENST00000378300 MOKQ9UQ07 419 aa12.46□□□□□ -0.41
TPM2-204ENST00000378300 NOSIPQ9Y314 301 aaKnown RBP12.46□□□□□ -0.41
TPM2-204ENST00000378300 AHRRA9YTQ3 701 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 J3QRE1 110 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 CRABP1P29762 137 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 CSNK1A1P48729 337 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 ETV1P50549 477 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 GGTLC2Q14390 218 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 THEM4Q5T1C6 240 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 RTL6Q6ICC9 239 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 SEM1Q6ZVN7 128 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 LINGO2Q7L985 606 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 HDDC2Q7Z4H3 204 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 P4HA3Q7Z4N8 544 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.46□□□□□ -0.42
TPM2-204ENST00000378300 CCDC190Q86UF4 302 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 C20orf196Q8IYI0 205 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 C9orf106Q8NAJ2 232 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 PHF3Q92576 2039 aaKnown RBP12.46□□□□□ -0.42
TPM2-204ENST00000378300 FGF20Q9NP95 211 aaPredicted RBP12.46□□□□□ -0.42
TPM2-204ENST00000378300 MRPL22Q9NWU5 206 aaKnown RBP12.46□□□□□ -0.42
TPM2-204ENST00000378300 RCE1Q9Y256 329 aa12.46□□□□□ -0.42
TPM2-204ENST00000378300 FREM1Q5H8C1 2179 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 ZNF724A8MTY0 619 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 GPR171O14626 319 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 RAB36O95755 333 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 PTHP01270 115 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 HLA-DQA2P01906 255 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 SCG5P05408 212 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 YES1P07947 543 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 CDAP32320 146 aa12.45□□□□□ -0.42
TPM2-204ENST00000378300 CD79BP40259 229 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms