RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SLC1A7O00341 560 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 XPNPEP2O43895 674 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 APOL3O95236 402 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 HRGP04196 525 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 RNF224P0DH78 156 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 MSR1P21757 451 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 SRSF1Q07955 248 aaKnown RBP eCLIP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 GABRA6Q16445 453 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 FBXL19-AS1Q494R0 122 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 NRN1LQ496H8 165 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 SFRP5Q5T4F7 317 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 SLC22A24Q8N4F4 322 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 CA5BP1Q8WTZ4 195 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 BCL2L2Q92843 193 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 ZNF224Q9NZL3 707 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 LRRK2Q5S007 2527 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 A0A096LPE4 126 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 A0A1W2PPZ6 126 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 HLA-DQA2P01906 255 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 MRPL3P09001 348 aaKnown RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 PSMB1P20618 241 aaKnown RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 AGAP20933 346 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 NAA10P41227 235 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 RPS27P42677 84 aaKnown RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 SLC15A1P46059 708 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 MTNR1AP48039 350 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 FAM27E3Q08E93 113 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 TMED1Q13445 227 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 ENDOGQ14249 297 aaKnown RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 HIKESHIQ53FT3 197 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 ANKRD16Q6P6B7 361 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 SHFQ7M4L6 423 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 ZNF808Q8N4W9 903 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 C1orf162Q8NEQ5 155 aaPredicted RBP18.66■□□□□ 0.58
CBWD3-202ENST00000377342 RNFT2Q96EX2 444 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 BOD1Q96IK1 185 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 SH3GL3Q99963 347 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 LRCH1Q9Y2L9 728 aa18.66■□□□□ 0.58
CBWD3-202ENST00000377342 TENM4Q6N022 2769 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 ZNF503-AS2A6NEH8 195 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 NPR2P20594 1047 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 CD79BP40259 229 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 BLVRAP53004 296 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 SGCAQ16586 387 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 FAM27BQ5VT28 67 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 ERI1Q8IV48 349 aaKnown RBP18.65■□□□□ 0.58
CBWD3-202ENST00000377342 OR51G2Q8NGK0 314 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 SMAP2Q8WU79 429 aaPredicted RBP18.65■□□□□ 0.58
CBWD3-202ENST00000377342 LGALS12Q96DT0 336 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 ZNF416Q9BWM5 594 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 SIAEQ9HAT2 523 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 PLCXD1Q9NUJ7 323 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 ELOVL5Q9NYP7 299 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 LHFPL6Q9Y693 200 aa18.65■□□□□ 0.58
CBWD3-202ENST00000377342 HELZ2Q9BYK8 2649 aaKnown RBP18.65■□□□□ 0.58
CBWD3-202ENST00000377342 ADRA2AP08913 450 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 CXCR4P61073 352 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 ADAM8P78325 824 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 TGFBR3Q03167 851 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 TFF3Q07654 80 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 PCK2Q16822 640 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 TBRG1Q3YBR2 411 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 BHLHA15Q7RTS1 189 aaPredicted RBP18.64■□□□□ 0.57
CBWD3-202ENST00000377342 SKA3Q8IX90 412 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 ZNF786Q8N393 782 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 LRRC18Q8N456 261 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 BPIFB6Q8NFQ5 453 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 OR4F15Q8NGB8 312 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 FGFBP3Q8TAT2 258 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 INTS14Q96SY0 518 aa18.64■□□□□ 0.57
CBWD3-202ENST00000377342 CNN2Q99439 309 aaKnown RBP18.64■□□□□ 0.57
CBWD3-202ENST00000377342 MRPS18AQ9NVS2 196 aaKnown RBP18.64■□□□□ 0.57
CBWD3-202ENST00000377342 SNTNA6NMZ2 147 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 SBK2P0C263 348 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 OR8G3PP0DMU2 310 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 ENTPD1P49961 510 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 XKRXQ6PP77 449 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 OR6N2Q8NGY6 317 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 FBXO17Q96EF6 278 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 PAK1IP1Q9NWT1 392 aaPredicted RBP18.63■□□□□ 0.57
CBWD3-202ENST00000377342 PSORS1C1Q9UIG5 152 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 RPL36Q9Y3U8 105 aaKnown RBP18.63■□□□□ 0.57
CBWD3-202ENST00000377342 ANKHD1Q8IWZ3 2542 aaKnown RBP18.63■□□□□ 0.57
CBWD3-202ENST00000377342 CIB4A0PJX0 185 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 J3QRE1 110 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 FAM20BO75063 409 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 GRNP28799 593 aaKnown RBP18.63■□□□□ 0.57
CBWD3-202ENST00000377342 UGT2B10P36537 528 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 LSM6P62312 80 aaKnown RBP18.63■□□□□ 0.57
CBWD3-202ENST00000377342 RFLNBQ8N5W9 214 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 SGCDQ92629 289 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 NOX3Q9HBY0 568 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 FKBP14Q9NWM8 211 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 EXOGQ9Y2C4 368 aaKnown RBP18.63■□□□□ 0.57
CBWD3-202ENST00000377342 KLHDC2Q9Y2U9 406 aa18.63■□□□□ 0.57
CBWD3-202ENST00000377342 WIPF3A6NGB9 483 aa18.62■□□□□ 0.57
CBWD3-202ENST00000377342 CLDN14O95500 239 aa18.62■□□□□ 0.57
CBWD3-202ENST00000377342 CST2P09228 141 aa18.62■□□□□ 0.57
CBWD3-202ENST00000377342 SPARCP09486 303 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms