RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 RACGAP1Q9H0H5 632 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 CRLF2Q9HC73 371 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 MAN2C1Q9NTJ4 1040 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 C20orf141Q9NUB4 165 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 PCDHB10Q9UN67 800 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 MED31Q9Y3C7 131 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 GRIP1Q9Y3R0 1128 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 ENPP4Q9Y6X5 453 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 PKD1L1Q8TDX9 2849 aa11.27□□□□□ -0.61
CLCN6-205ENST00000376492 LOC105371242A0A075B767 164 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 VSTM5A8MXK1 200 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 OR7A10O76100 309 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 AVPP01185 164 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 FABP3P05413 133 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 TSPAN19P0C672 248 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 GAAP10253 952 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 RHCEP18577 417 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 EPHA1P21709 976 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 FUT4P22083 530 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 COL8A2P25067 703 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 ALDH3B1P43353 468 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 GPR6P46095 362 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-205ENST00000376492 HMGA2P52926 109 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 SH3BGRP55822 239 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-205ENST00000376492 SMIM11AP58511 58 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 POU3F1Q03052 451 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-205ENST00000376492 MAD2L1BPQ15013 274 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-205ENST00000376492 TRAM2Q15035 370 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 FAHD2BQ6P2I3 314 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-205ENST00000376492 C20orf196Q8IYI0 205 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 RNF113BQ8IZP6 322 aaKnown RBP11.26□□□□□ -0.61
CLCN6-205ENST00000376492 PACRGLQ8N7B6 248 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 PIK3C3Q8NEB9 887 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 YIPF5Q969M3 257 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 FAHD2AQ96GK7 314 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 MS4A3Q96HJ5 214 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 MOV10Q9HCE1 1003 aaKnown RBP11.26□□□□□ -0.61
CLCN6-205ENST00000376492 NDUFAF4Q9P032 175 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 RHCGQ9UBD6 479 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 REV1Q9UBZ9 1251 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 AURKCQ9UQB9 309 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 CMAHPQ9Y471 501 aa11.26□□□□□ -0.61
CLCN6-205ENST00000376492 ZNF726A6NNF4 738 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 TRIM77I1YAP6 450 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 M0R233 179 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 HOXB1P14653 301 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-205ENST00000376492 NR4A1P22736 598 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 ARR3P36575 388 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 CAPZA2P47755 286 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 ARHGDIAP52565 204 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 CEACAM16Q2WEN9 425 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 AWAT1Q58HT5 328 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 CYP4Z1Q86W10 505 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 ZDHHC21Q8IVQ6 265 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 GPR137CQ8N3F9 429 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 LINC00471Q8N535 108 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 FAM86B1Q8N7N1 296 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 OR6X1Q8NH79 312 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 MRPL24Q96A35 216 aaKnown RBP11.25□□□□□ -0.61
CLCN6-205ENST00000376492 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 EMC6Q9BV81 110 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 RBM4Q9BWF3 364 aaKnown RBP11.25□□□□□ -0.61
CLCN6-205ENST00000376492 VCXQ9H320 206 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 ANKRD19PQ9H560 264 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 NMNAT1Q9HAN9 279 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-205ENST00000376492 GPR35Q9HC97 309 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 ZNF275Q9NSD4 429 aaPredicted RBP11.25□□□□□ -0.61
CLCN6-205ENST00000376492 MED29Q9NX70 200 aa11.25□□□□□ -0.61
CLCN6-205ENST00000376492 MYEF2Q9P2K5 600 aaKnown RBP11.25□□□□□ -0.61
CLCN6-205ENST00000376492 TGP01266 2768 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 A0A087WUU8 490 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 A0A1W2PRQ8 180 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 C11orf98E9PRG8 122 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 BLOC1S5-TXNDC5H3BN57 136 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 RNF13O43567 381 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 SYNGR3O43761 229 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 NCR1O76036 304 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 HLA-HP01893 362 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 TFP02787 698 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 ACHEP22303 614 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 VHLP40337 213 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 LMO4P61968 165 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 PRKCDQ05655 676 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 RPL18Q07020 188 aaKnown RBP11.24□□□□□ -0.61
CLCN6-205ENST00000376492 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 DGCR6Q14129 220 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 PHYHD1Q5SRE7 291 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 OGFRL1Q5TC84 451 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-205ENST00000376492 USP43Q70EL4 1123 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 SLC35D2Q76EJ3 337 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 NANOGNBQ7Z5D8 188 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 LRP11Q86VZ4 500 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 WDFY1Q8IWB7 410 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 OR51F2Q8NH61 342 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 ACOT11Q8WXI4 607 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-205ENST00000376492 BPIFA2Q96DR5 249 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 SEPHS2Q99611 448 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 SLC6A7Q99884 636 aa11.24□□□□□ -0.61
CLCN6-205ENST00000376492 C9orf16Q9BUW7 83 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms