RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TM4SF18Q96CE8 201 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 RHBDD3Q9Y3P4 386 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 A0A1B0GTW7 788 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 A8MU76 341 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 TRAPPC6AO75865 159 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CTSAP10619 480 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF28P17035 718 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 BTG2P78543 158 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 OR7E24Q6IFN5 339 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF705AQ6ZN79 300 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 SLC38A6Q8IZM9 456 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 M1APQ8TC57 530 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 MARF1Q9Y4F3 1742 aaKnown RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 A0A087WUU8 490 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 GABREP78334 506 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ST8SIA1Q92185 356 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 KIR3DX1Q9H7L2 352 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 HMGN4O00479 90 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CRMP1Q14194 572 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 VRK2Q86Y07 508 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 ANAPC16Q96DE5 110 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 EXOGQ9Y2C4 368 aaKnown RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 TAPBPO15533 448 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 DUS4LO95620 317 aaKnown RBP9.36□□□□□ -0.91
PTCH1-204ENST00000375290 GABRA2P47869 451 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 MEP1BQ16820 701 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 TFAP2EQ6VUC0 442 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 CAPNS2Q96L46 248 aa9.36□□□□□ -0.91
PTCH1-204ENST00000375290 SLC17A2O00624 439 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 PPP6CO00743 305 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 CTNSO60931 367 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 ZFAND5O76080 213 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 CD70P32970 193 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 SIM1P81133 766 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 OR52R1Q8NGF1 315 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 GPR173Q9NS66 373 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 A0A1W2PQU0 124 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 WNT7BP56706 349 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 RPL27P61353 136 aaKnown RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 POU3F1Q03052 451 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 GPM6BQ13491 265 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 TCTN3Q6NUS6 607 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 SEZ6L2Q6UXD5 910 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 CATSPERDQ86XM0 798 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 FBXL6Q8N531 539 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 SFT2D1Q8WV19 159 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 DIO2Q92813 273 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 DLL4Q9NR61 685 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 AK3Q9UIJ7 227 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 CLDN34H7C241 214 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 PXNP49023 591 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 MTCP1P56278 107 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 NDUFA6P56556 154 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 BAXQ07812 192 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 PJVKQ0ZLH3 352 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 PMPCAQ10713 525 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 PPP1R1CQ8WVI7 109 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 GLAP06280 429 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 NPPBP16860 134 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 FPR2P25090 351 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 POLR2IP36954 125 aaKnown RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 RPS18P62269 152 aaKnown RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 SHHQ15465 462 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 OR5T1Q8NG75 326 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 OR52E1Q8NGJ3 308 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 FZD1Q9UP38 647 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 CEBPZOSA8MTT3 80 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 MBPP02686 304 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 CCNOP22674 350 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 MFAP5Q13361 173 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 SLC16A12Q6ZSM3 486 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 OR52I2Q8NH67 350 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 RBM24Q9BX46 236 aaKnown RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 GLIPR2Q9H4G4 154 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 VDAC3Q9Y277 283 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 TNFRSF10CO14798 259 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 ACKR3P25106 362 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 NAAAQ02083 359 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 SLC9A3R2Q15599 337 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 C18orf21Q32NC0 220 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF626Q68DY1 528 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 LHFPL2Q6ZUX7 228 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 BRI3BPQ8WY22 251 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 ACTR3CQ9C0K3 210 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 CXXC1Q9P0U4 656 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 NAT6Q93015 286 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 CTDSP1Q9GZU7 261 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 AP4M1O00189 453 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 Q6ZRG5 221 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 GTF2H5Q6ZYL4 71 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 GAS2L1Q99501 681 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-204ENST00000375290 VN1R3Q9BXE9 311 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 SHARPINQ9H0F6 387 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 RHOFQ9HBH0 211 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 REV1Q9UBZ9 1251 aa9.35□□□□□ -0.91
PTCH1-204ENST00000375290 J3KTA2 159 aa9.34□□□□□ -0.91
PTCH1-204ENST00000375290 SIX6O95475 246 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms