RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ZNF529Q6P280 563 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 PNCKQ6P2M8 343 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 FAHD1Q6P587 224 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 RAB43Q86YS6 212 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 TTC9BQ8N6N2 239 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 KBTBD8Q8NFY9 601 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 TCTEX1D2Q8WW35 142 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 SCAMP4Q969E2 229 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 BIRC8Q96P09 236 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 FAM234AQ9H0X4 552 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 ABCG5Q9H222 651 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 C1orf123Q9NWV4 160 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 PIPOXQ9P0Z9 390 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 PPIAL4AQ9Y536 164 aa8.11□□□□□ -1.11
UBR4-201ENST00000375218 NPIPB5A8MRT5 1133 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 OAS1P00973 400 aaKnown RBP8.1□□□□□ -1.11
UBR4-201ENST00000375218 C1QTNF9P0C862 333 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 VPREB1P12018 145 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 FBLP22087 321 aaKnown RBP8.1□□□□□ -1.11
UBR4-201ENST00000375218 ZXDBP98169 803 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 GNMTQ14749 295 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 SCGB2B2Q4G0G5 96 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 DHRS4L2Q6PKH6 230 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 XYLT1Q86Y38 959 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 ACDQ96AP0 544 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 HIST1H2AAQ96QV6 131 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 SEMA6AQ9H2E6 1030 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 TUBB1Q9H4B7 451 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 DNMT3BQ9UBC3 853 aaKnown RBP8.1□□□□□ -1.11
UBR4-201ENST00000375218 CD207Q9UJ71 328 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 MYOFQ9NZM1 2061 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 PLPP1O14494 284 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 METTL15P1P0C7V9 234 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 BMP7P18075 431 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 RPL15P61313 204 aaKnown RBP8.1□□□□□ -1.11
UBR4-201ENST00000375218 PKIAP61925 76 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 PRKCDQ05655 676 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 CDH18Q13634 790 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 FASTKQ14296 549 aaKnown RBP8.1□□□□□ -1.11
UBR4-201ENST00000375218 CLLU1OSQ5K130 101 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 SSX6Q7RTT6 188 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 MDGA2Q7Z553 956 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 MMGT1Q8N4V1 131 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 EMC1Q8N766 993 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 ABHD4Q8TB40 342 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 GPR78Q96P69 363 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 GPR22Q99680 433 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 SLC30A3Q99726 388 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 SLC25A13Q9UJS0 675 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 CDY1Q9Y6F8 540 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 COL1A2P08123 1366 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 ANXA9O76027 345 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 CYBBP04839 570 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 MYL2P10916 166 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 KIR3DL1P43629 444 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 GNG3P63215 75 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 CNTN1Q12860 1018 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 CYP1B1Q16678 543 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 CDO1Q16878 200 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 SLC36A2Q495M3 483 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 REP15Q6BDI9 236 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 LCTLQ6UWM7 567 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 C16orf89Q6UX73 402 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 COX15Q7KZN9 410 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 ATG4AQ8WYN0 398 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 FLYWCH2Q96CP2 140 aaKnown RBP8.1□□□□□ -1.11
UBR4-201ENST00000375218 QTRT1Q9BXR0 403 aaKnown RBP8.1□□□□□ -1.11
UBR4-201ENST00000375218 RDH14Q9HBH5 336 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 CLN6Q9NWW5 311 aa8.1□□□□□ -1.11
UBR4-201ENST00000375218 DUS2Q9NX74 493 aaKnown RBP8.1□□□□□ -1.11
UBR4-201ENST00000375218 ATMQ13315 3056 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 SMIM28A0A1B0GU29 152 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 TCRBV7S3A2A0A539 114 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 MPZL2O60487 215 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 LYPLA1O75608 230 aaPredicted RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 GDF1P27539 372 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 PLP1P60201 277 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 C1QTNF8P60827 252 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 CDKL1Q00532 357 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 ANKRD16Q6P6B7 361 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 TBC1D26Q86UD7 250 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 TLCD1Q96CP7 247 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 LHX9Q9NQ69 397 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 FOXJ2Q9P0K8 574 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 MIA3Q5JRA6 1907 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 KIAA1549LQ6ZVL6 1849 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 A0A087X0K7 114 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 HIDE1A8MVS5 230 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 YY2O15391 372 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 FARS2O95363 451 aaKnown RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 GJB5O95377 273 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 SHBGP04278 402 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 ITPKBP27987 946 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 GPR1P46091 355 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 GPR143P51810 404 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 SYPL1Q16563 259 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 SERTAD4-AS1Q5TG53 156 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 MED27Q6P2C8 311 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 ZFP28Q8NHY6 868 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms