RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PELI2Q9HAT8 420 aa18.64■□□□□ 0.57
TMEFF1-201ENST00000374879 SERTAD3Q9UJW9 196 aa18.64■□□□□ 0.57
TMEFF1-201ENST00000374879 KPTNQ9Y664 436 aa18.64■□□□□ 0.57
TMEFF1-201ENST00000374879 PRAMEF26H0Y7S4 382 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 M0R036 132 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 MBTPS2O43462 519 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ADH1AP07327 375 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ELFN1P0C7U0 828 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 MAOAP21397 527 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 REEP5Q00765 189 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 SSBP1Q04837 148 aaKnown RBP18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 CHAF1BQ13112 559 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 CCINQ13939 588 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ODF4Q2M2E3 257 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 LY6G5CQ5SRR4 150 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ANKRD33Q7Z3H0 272 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 CD163Q86VB7 1156 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 SLC25A42Q86VD7 318 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 KREMEN2Q8NCW0 462 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 OR51A4Q8NGJ6 313 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ZPLD1Q8TCW7 415 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 MALSU1Q96EH3 234 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 LURAP1Q96LR2 239 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 PHB2Q99623 299 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 SPHK2Q9NRA0 654 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 CHRNA9Q9UGM1 479 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 MSRAQ9UJ68 235 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ADAM18Q9Y3Q7 739 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 NPIPA5A0A0B4J1W7 369 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 NPIPA7E9PJI5 369 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 H0YIZ8 118 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 LRP3O75074 770 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 AIFM1O95831 613 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ITGA5P08648 1049 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 NPIPA8P0DM63 369 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 S100A2P29034 98 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 CDX1P47902 265 aaPredicted RBP18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 DVL1P1P54792 670 aaPredicted RBP18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 SKP1P63208 163 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 RELQ04864 619 aaPredicted RBP18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 MRPL2Q5T653 305 aaKnown RBP18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 CCDC54Q8NEL0 328 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ZNF775Q96BV0 537 aaPredicted RBP18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 NMNAT3Q96T66 252 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ZBP1Q9H171 429 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 ZMAT3Q9HA38 289 aaKnown RBP18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 WIF1Q9Y5W5 379 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 HEATR5BQ9P2D3 2071 aa18.63■□□□□ 0.57
TMEFF1-201ENST00000374879 TRBV5-5A0A0J9YX44 114 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 LAMP2P13473 410 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 SCAND1P57086 179 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 NSUN5P2Q63ZY6 315 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 BTNL8Q6UX41 500 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 ANGPTL5Q86XS5 388 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 OR5K2Q8NHB8 316 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 IL36AQ9UHA7 158 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 TMED7Q9Y3B3 224 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 ZNF736B4DX44 427 aaPredicted RBP18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 OR10H2O60403 315 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 MOSPD3O75425 235 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 ZNF684Q5T5D7 378 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 LILRA6Q6PI73 481 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 ZNF627Q7L945 461 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 OR4S1Q8NGB4 309 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 SUSD6Q92537 303 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 TMEM106AQ96A25 262 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 KCNG2Q9UJ96 466 aa18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 ZNF346Q9UL40 294 aaKnown RBP18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 MRPS33Q9Y291 106 aaKnown RBP18.62■□□□□ 0.57
TMEFF1-201ENST00000374879 TRBV6-7A0A0A0MS04 114 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 HIST1H1BP16401 226 aaKnown RBP18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 VAMP1P23763 118 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 SERPINF1P36955 418 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 PBX2P40425 430 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 KIAA0141Q14154 515 aaPredicted RBP18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 SLC39A5Q6ZMH5 540 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 RNASE11Q8TAA1 199 aaKnown RBP18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 FAM3DQ96BQ1 224 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 MRGPRX3Q96LB0 322 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 LMF1Q96S06 567 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 ULBP3Q9BZM4 244 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 GAR1Q9NY12 217 aaKnown RBP18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 A0A1W2PPE2 198 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 TVP23AA6NH52 213 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 CDC40O60508 579 aaKnown RBP eCLIP18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 CYB5AP00167 134 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 IFNA17P01571 189 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 ZNF239Q16600 458 aaKnown RBP18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 EIPR1Q53HC9 387 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 FRMD1Q8N878 549 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 BHLHE23Q8NDY6 225 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 CA5BP1Q8WTZ4 195 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 ROBO4Q8WZ75 1007 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 MISP3Q96FF7 219 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 TGM7Q96PF1 710 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 CES1P1Q9UKY3 287 aa18.61■□□□□ 0.57
TMEFF1-201ENST00000374879 USP34Q70CQ2 3546 aa18.6■□□□□ 0.57
TMEFF1-201ENST00000374879 A0A1W2PPC1 479 aa18.6■□□□□ 0.57
TMEFF1-201ENST00000374879 BTBD17A6NE02 478 aa18.6■□□□□ 0.57
TMEFF1-201ENST00000374879 H7C1Q1 480 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms