RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OR7G1Q8NGA0 311 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 OR6F1Q8NGZ6 308 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 OR5W2Q8NH69 310 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 OR4C6Q8NH72 309 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 GRHL3Q8TE85 626 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 DOK4Q8TEW6 326 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 LIPHQ8WWY8 451 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 PTP4A1Q93096 173 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 OTULINQ96BN8 352 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 MSI2Q96DH6 328 aaKnown RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 SGTBQ96EQ0 304 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 RBM18Q96H35 190 aaKnown RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 ZC3HAV1LQ96H79 300 aaKnown RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 DGAT2Q96PD7 388 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 GPX7Q96SL4 187 aaPredicted RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 TEAD3Q99594 435 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CTRCQ99895 268 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TTYH2Q9BSA4 534 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TMED9Q9BVK6 235 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 HCAR1Q9BXC0 346 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 HOXD1Q9GZZ0 328 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 RAB33BQ9H082 229 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 TPK1Q9H3S4 243 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 PPP1R3EQ9H7J1 279 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 MED20Q9H944 212 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 ISG20L2Q9H9L3 353 aaKnown RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 TBC1D17Q9HA65 648 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 MCCC2Q9HCC0 563 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 Q9N2J8 555 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 MKKSQ9NPJ1 570 aaPredicted RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 EXOSC3Q9NQT5 275 aaKnown RBP4.3□□□□□ -1.72
USP48-202ENST00000374730 STARD5Q9NSY2 213 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 HCN3Q9P1Z3 774 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 PRODH2Q9UF12 536 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 EPHA6Q9UF33 1036 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CHRNA9Q9UGM1 479 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 IL20RAQ9UHF4 553 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 PLCL2Q9UPR0 1127 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 MMACHCQ9Y4U1 282 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 KNL1Q8NG31 2342 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 CPAMD8Q8IZJ3 1885 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 DNAH14Q0VDD8 3507 aa4.3□□□□□ -1.72
USP48-202ENST00000374730 EYSQ5T1H1 3165 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 SPAG17Q6Q759 2223 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 RP1P56715 2156 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 TRAV27A0A087WT01 109 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 A0A087WUJ7 227 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 TRAV1-2A0A0B4J238 106 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 IGHV1OR15-9A0A0B4J2B8 117 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 MEIOCA2RUB1 952 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 B4DXG7 233 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ARPC3O15145 178 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 PLA2G10O15496 165 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OGG1O15527 345 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 IDH3BO43837 385 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 HPGDSO60760 199 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 CCNKO75909 580 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OR7A10O76100 309 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 SERPINA3P01011 423 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 CSTAP01040 98 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 TFP02787 698 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 NGFRP08138 427 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 OR2T7P0C7T2 308 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 SLC2A2P11168 524 aaPredicted RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 PTNP21246 168 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 MYL9P24844 172 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 CD27P26842 260 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 RBMS1P29558 406 aaKnown RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 LCN1P31025 176 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 CAV3P56539 151 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 HSF2Q03933 536 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 LGALS3BPQ08380 585 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 C1orf61Q13536 156 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 QPRTQ15274 297 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 SF3A2Q15428 464 aaKnown RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 TAB1Q15750 504 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 KCNJ8Q15842 424 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ANXA2RQ3ZCQ2 193 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 CDONQ4KMG0 1287 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 KLHL12Q53G59 568 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 PYDC2Q56P42 97 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 SLC35D3Q5M8T2 416 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 HACD4Q5VWC8 232 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 RSBN1Q5VWQ0 802 aaPredicted RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 TRIQKQ629K1 86 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 DMKNQ6E0U4 476 aaPredicted RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 DGAT2L7PQ6IED9 249 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ARL9Q6T311 187 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 DHRS13Q6UX07 377 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 DPY19L2P2Q6ZN68 376 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 TRILQ7L0X0 811 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 NUP54Q7Z3B4 507 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 PXKQ7Z7A4 578 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 LRRC28Q86X40 367 aaPredicted RBP4.29□□□□□ -1.72
USP48-202ENST00000374730 CADM2Q8N3J6 435 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 MS4A15Q8N5U1 240 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 ZNF614Q8N883 585 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 BCORP1Q8N888 145 aa4.29□□□□□ -1.72
USP48-202ENST00000374730 DUSP18Q8NEJ0 188 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms