RNA–Protein interactions for RNA: ENST00000373559.8

HDAC8-203, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-203ENST00000373559 HMGA2P52926 109 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 LCN6P62502 163 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 HSF2Q03933 536 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 KRTAP1-1Q07627 177 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 SGCAQ16586 387 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 MSMPQ1L6U9 139 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 PABPC1L2AQ5JQF8 200 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 TRPM8Q7Z2W7 1104 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 DHFR2Q86XF0 187 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 PAQR4Q8N4S7 273 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-203ENST00000373559 FANK1Q8TC84 345 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 BCAS4Q8TDM0 211 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 C10orf105Q8TEF2 133 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 FAM168AQ92567 244 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 RASD2Q96D21 266 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 VRK1Q99986 396 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-203ENST00000373559 MRPL37Q9BZE1 423 aaKnown RBP13.74□□□□□ -0.21
HDAC8-203ENST00000373559 RAB1BQ9H0U4 201 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 LRMDAQ9H2I8 198 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 CDH20Q9HBT6 801 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 TAS2R1Q9NYW7 299 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 VSX1Q9NZR4 365 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-203ENST00000373559 TMCC3Q9ULS5 477 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 LYVE1Q9Y5Y7 322 aa13.74□□□□□ -0.21
HDAC8-203ENST00000373559 FN1P02751 2386 aaKnown RBP13.74□□□□□ -0.21
HDAC8-203ENST00000373559 ABCA1O95477 2261 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 A0A1W2PPL8 197 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 NDUFS8O00217 210 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 SYNGR3O43761 229 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 OR10H3O60404 316 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 ERCC1P07992 297 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-203ENST00000373559 IGFBP1P08833 259 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-203ENST00000373559 LAP3P28838 519 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 APLNRP35414 380 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 GSSP48637 474 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 PCBD1P61457 104 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 ENDOGQ14249 297 aaKnown RBP13.73□□□□□ -0.21
HDAC8-203ENST00000373559 C1orf94Q6P1W5 598 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 SYT9Q86SS6 491 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 LINC00471Q8N535 108 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 CPEB3Q8NE35 698 aaKnown RBP13.73□□□□□ -0.21
HDAC8-203ENST00000373559 BCL2L14Q9BZR8 327 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 DYNLRB1Q9NP97 96 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 POLE4Q9NR33 117 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 HIVEP2P31629 2446 aa13.73□□□□□ -0.21
HDAC8-203ENST00000373559 NAV3Q8IVL0 2385 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 C12orf71A8MTZ7 269 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 M0R233 179 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 IMPA2O14732 288 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 ARPC3O15145 178 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 ICMTO60725 284 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 LY6HO94772 140 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 CTLA4P16410 223 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 HOXB4P17483 251 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-203ENST00000373559 STOMP27105 288 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 APEX1P27695 318 aaKnown RBP13.72□□□□□ -0.21
HDAC8-203ENST00000373559 SLC6A6P31641 620 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 PDLIM4P50479 330 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 PSG4Q00888 419 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 MS4A2Q01362 244 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 LOXL1Q08397 574 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-203ENST00000373559 TSPAN31Q12999 210 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 PGBD2Q6P3X8 592 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 ZNF620Q6ZNG0 422 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 Q71RC1 249 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-203ENST00000373559 OR4C15Q8NGM1 316 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 NEU4Q8WWR8 484 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-203ENST00000373559 POM121Q96HA1 1249 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 POM121L2Q96KW2 1035 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 SNX18Q96RF0 628 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 TRIM15Q9C019 465 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 OR2H1Q9GZK4 316 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 SYT4Q9H2B2 425 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 OR52D1Q9H346 318 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 IL20RAQ9UHF4 553 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 IER3IP1Q9Y5U9 82 aa13.72□□□□□ -0.21
HDAC8-203ENST00000373559 IGLV3-9A0A075B6K5 115 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 VWC2LB2RUY7 222 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 SOCS2O14508 198 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 CCL2P13500 99 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 ZNF250P15622 560 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 RAD52P43351 418 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 RFX4Q33E94 735 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 FAM98BQ52LJ0 330 aaKnown RBP13.71□□□□□ -0.21
HDAC8-203ENST00000373559 RGS7BPQ6MZT1 257 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-203ENST00000373559 PTCHD4Q6ZW05 846 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 MAPK1IP1LQ8NDC0 245 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 GNPDA2Q8TDQ7 276 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 CCDC124Q96CT7 223 aaKnown RBP13.71□□□□□ -0.21
HDAC8-203ENST00000373559 ZNF416Q9BWM5 594 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 WNT5BQ9H1J7 359 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 TIMM10BQ9Y5J6 103 aa13.71□□□□□ -0.21
HDAC8-203ENST00000373559 LOC100509620A0A075B734 347 aa13.7□□□□□ -0.22
HDAC8-203ENST00000373559 LOC390937A0A1W2PQ73 354 aa13.7□□□□□ -0.22
HDAC8-203ENST00000373559 TNFRSF11BO00300 401 aa13.7□□□□□ -0.22
HDAC8-203ENST00000373559 ACOT8O14734 319 aa13.7□□□□□ -0.22
HDAC8-203ENST00000373559 IDH3BO43837 385 aa13.7□□□□□ -0.22
HDAC8-203ENST00000373559 KHDRBS3O75525 346 aaKnown RBP13.7□□□□□ -0.22
HDAC8-203ENST00000373559 UBOX5O94941 541 aa13.7□□□□□ -0.22
HDAC8-203ENST00000373559 PPP1R3DO95685 299 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms