RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 RALGAPA1Q6GYQ0 2036 aa21.36■■□□□ 1.01
CDK9-201ENST00000373264 TRBV11-1A0A0K0K1C0 115 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 A0A1W2PQM1 296 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 K7ESF4 209 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 EIF1AYO14602 144 aaKnown RBP21.35■■□□□ 1.01
CDK9-201ENST00000373264 ECDO95905 644 aaPredicted RBP21.35■■□□□ 1.01
CDK9-201ENST00000373264 RAF1P04049 648 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 HEXBP07686 556 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 RAG2P55895 527 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 POU3F1Q03052 451 aaPredicted RBP21.35■■□□□ 1.01
CDK9-201ENST00000373264 PUDPQ08623 228 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 CSRP2Q16527 193 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 PCGF3Q3KNV8 242 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 LUZP2Q86TE4 346 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 ASB5Q8WWX0 329 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 DVL3Q92997 716 aaPredicted RBP21.35■■□□□ 1.01
CDK9-201ENST00000373264 HEXA-AS1Q9H8Q6 139 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 CNTRLQ7Z7A1 2325 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 TRAV18A0A075B6X5 111 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 FGD2Q7Z6J4 655 aa21.35■■□□□ 1.01
CDK9-201ENST00000373264 ZNF436Q9C0F3 470 aaPredicted RBP21.35■■□□□ 1.01
CDK9-201ENST00000373264 RANBP3Q9H6Z4 567 aaPredicted RBP21.35■■□□□ 1.01
CDK9-201ENST00000373264 ELF5Q9UKW6 265 aaPredicted RBP21.35■■□□□ 1.01
CDK9-201ENST00000373264 XRCC3O43542 346 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 SULT1B1O43704 296 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 DNASE1P24855 282 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 PER3P56645 1201 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 TMEM225Q6GV28 225 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 DCXRQ7Z4W1 244 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 FAM3DQ96BQ1 224 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 ACTR6Q9GZN1 396 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 MRPL39Q9NYK5 338 aaKnown RBP21.34■■□□□ 1.01
CDK9-201ENST00000373264 ZNF69Q9UC07 566 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 GGT3PA6NGU5 568 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 PHYHO14832 338 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 ZNF432O94892 652 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 EIF1AXP47813 144 aaKnown RBP21.34■■□□□ 1.01
CDK9-201ENST00000373264 UBE2MP61081 183 aaKnown RBP21.34■■□□□ 1.01
CDK9-201ENST00000373264 OLFML2AQ68BL7 652 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 OR10K2Q6IF99 312 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 PTCRAQ6ISU1 281 aaPredicted RBP21.34■■□□□ 1.01
CDK9-201ENST00000373264 FDX2Q6P4F2 183 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 PAPD4Q6PIY7 484 aaKnown RBP21.34■■□□□ 1.01
CDK9-201ENST00000373264 LRFN4Q6PJG9 635 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 SEZ6L2Q6UXD5 910 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 CATSPERDQ86XM0 798 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 CARFQ8N187 725 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 OR1J4Q8NGS1 313 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 WDR77Q9BQA1 342 aaPredicted RBP21.34■■□□□ 1.01
CDK9-201ENST00000373264 EIF3KQ9UBQ5 218 aaKnown RBP21.34■■□□□ 1.01
CDK9-201ENST00000373264 DHDHQ9UQ10 334 aa21.34■■□□□ 1.01
CDK9-201ENST00000373264 DCDC2BA2VCK2 349 aa21.33■■□□□ 1.01
CDK9-201ENST00000373264 PYCARD-AS1I3L0S3 204 aa21.33■■□□□ 1.01
CDK9-201ENST00000373264 ROM1Q03395 351 aa21.33■■□□□ 1.01
CDK9-201ENST00000373264 GLO1Q04760 184 aa21.33■■□□□ 1.01
CDK9-201ENST00000373264 ANKRD16Q6P6B7 361 aa21.33■■□□□ 1.01
CDK9-201ENST00000373264 OR4C16Q8NGL9 310 aa21.33■■□□□ 1.01
CDK9-201ENST00000373264 OR8S1Q8NH09 359 aa21.33■■□□□ 1.01
CDK9-201ENST00000373264 OR52N5Q8NH56 324 aa21.33■■□□□ 1.01
CDK9-201ENST00000373264 ZMAT3Q9HA38 289 aaKnown RBP21.33■■□□□ 1.01
CDK9-201ENST00000373264 AKAP7Q9P0M2 348 aaPredicted RBP21.33■■□□□ 1.01
CDK9-201ENST00000373264 TMEM272A0A1B0GTI8 110 aa21.33■■□□□ 1
CDK9-201ENST00000373264 CIB4A0PJX0 185 aa21.33■■□□□ 1
CDK9-201ENST00000373264 ZNF81P51508 661 aa21.33■■□□□ 1
CDK9-201ENST00000373264 RIDAP52758 137 aaKnown RBP21.33■■□□□ 1
CDK9-201ENST00000373264 BLVRAP53004 296 aa21.33■■□□□ 1
CDK9-201ENST00000373264 GNG2P59768 71 aa21.33■■□□□ 1
CDK9-201ENST00000373264 AP3S2P59780 193 aa21.33■■□□□ 1
CDK9-201ENST00000373264 ELFN2Q5R3F8 820 aa21.33■■□□□ 1
CDK9-201ENST00000373264 THOC7Q6I9Y2 204 aaKnown RBP21.33■■□□□ 1
CDK9-201ENST00000373264 SLC26A10Q8NG04 563 aa21.33■■□□□ 1
CDK9-201ENST00000373264 STK35Q8TDR2 534 aa21.33■■□□□ 1
CDK9-201ENST00000373264 ASB10Q8WXI3 467 aa21.33■■□□□ 1
CDK9-201ENST00000373264 ASB17Q8WXJ9 295 aa21.33■■□□□ 1
CDK9-201ENST00000373264 MRPS18BQ9Y676 258 aaKnown RBP21.33■■□□□ 1
CDK9-201ENST00000373264 PHF3Q92576 2039 aaKnown RBP21.33■■□□□ 1
CDK9-201ENST00000373264 A0A1B0GTQ1 180 aa21.32■■□□□ 1
CDK9-201ENST00000373264 SCRG1O75711 98 aa21.32■■□□□ 1
CDK9-201ENST00000373264 MPC2O95563 127 aa21.32■■□□□ 1
CDK9-201ENST00000373264 VSIG10L2P0DP72 767 aa21.32■■□□□ 1
CDK9-201ENST00000373264 ZNF24P17028 368 aa21.32■■□□□ 1
CDK9-201ENST00000373264 CCL7P80098 99 aa21.32■■□□□ 1
CDK9-201ENST00000373264 SPOCK1Q08629 439 aa21.32■■□□□ 1
CDK9-201ENST00000373264 NHLRC1Q6VVB1 395 aa21.32■■□□□ 1
CDK9-201ENST00000373264 SLX1AQ9BQ83 275 aa21.32■■□□□ 1
CDK9-201ENST00000373264 DPCDQ9BVM2 203 aaPredicted RBP21.32■■□□□ 1
CDK9-201ENST00000373264 LY6G6EA0A0G2JKS1 128 aa21.32■■□□□ 1
CDK9-201ENST00000373264 ICMTO60725 284 aa21.32■■□□□ 1
CDK9-201ENST00000373264 ALOX12BO75342 701 aa21.32■■□□□ 1
CDK9-201ENST00000373264 IGHMP01871 453 aa21.32■■□□□ 1
CDK9-201ENST00000373264 SNTA1Q13424 505 aa21.32■■□□□ 1
CDK9-201ENST00000373264 RAB11BQ15907 218 aa21.32■■□□□ 1
CDK9-201ENST00000373264 ZBTB37Q5TC79 503 aa21.32■■□□□ 1
CDK9-201ENST00000373264 TMEM71Q6P5X7 295 aa21.32■■□□□ 1
CDK9-201ENST00000373264 HGDQ93099 445 aa21.32■■□□□ 1
CDK9-201ENST00000373264 NPDC1Q9NQX5 325 aaPredicted RBP21.32■■□□□ 1
CDK9-201ENST00000373264 U3KQA8 63 aa21.32■■□□□ 1
CDK9-201ENST00000373264 ANKUB1A6NFN9 424 aa21.31■■□□□ 1
CDK9-201ENST00000373264 NPIPA5E9PKD4 350 aa21.31■■□□□ 1
CDK9-201ENST00000373264 OR2T1O43869 369 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms