RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 MRGPRFQ96AM1 343 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MUCL1Q96DR8 90 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MRGPRX3Q96LB0 322 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ADAM2Q99965 735 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MRI1Q9BV20 369 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 DPH1Q9BZG8 443 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 OR2S2Q9NQN1 319 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 PARP11Q9NR21 331 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 SPHK2Q9NRA0 654 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 UPB1Q9UBR1 384 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 VSIG4Q9Y279 399 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 KCNE3Q9Y6H6 103 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 LOC100509620A0A075B734 347 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MBLAC1A4D2B0 266 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ADAM10O14672 748 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 TBX6O95947 436 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 THBS1P07996 1170 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 EDNRAP25101 427 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 CD52P31358 61 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MNX1P50219 401 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 NANOS3P60323 173 aaKnown RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 GAGE1Q13065 139 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 PPP1R1AQ13522 171 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 AGERQ15109 404 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF585AQ6P3V2 769 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 CNKSR3Q6P9H4 555 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 TPGS1Q6ZTW0 290 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 KLHDC8AQ8IYD2 350 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF740Q8NDX6 193 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MITD1Q8WV92 249 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 HPSE2Q8WWQ2 592 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 PACRGQ96M98 296 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF350Q9GZX5 532 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 NEUROD4Q9HD90 331 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MSRAQ9UJ68 235 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 AMDHD2Q9Y303 409 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 FCF1Q9Y324 198 aaKnown RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MDC1Q14676 2089 aaKnown RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 B3GAT3O94766 335 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 OR2C1O95371 312 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 RAB3DO95716 219 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 DCNP07585 359 aaKnown RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MAKP20794 623 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 MAOAP21397 527 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 SULT1A2P50226 295 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 TDGF1P3P51864 188 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ISXQ2M1V0 245 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 EXOSC6Q5RKV6 272 aaKnown RBP8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ACOT4Q8N9L9 421 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 OR2A12Q8NGT7 310 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 RPS4Y2Q8TD47 263 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 GPX8Q8TED1 209 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 CST11Q9H112 138 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 OR52A5Q9H2C5 316 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 C20orf141Q9NUB4 165 aa8.66□□□□□ -1.02
SF3A3-201ENST00000373019 ARL5CA6NH57 179 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 ZFPL1O95159 310 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 IL2RAP01589 272 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 QDPRP09417 244 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 CRMP1Q14194 572 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 UBE2V2Q15819 145 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 PLEKHS1Q5SXH7 462 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 LYG2Q86SG7 212 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 SYS1Q8N2H4 156 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 OR2L13Q8N349 312 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF461Q8TAF7 563 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 FGF13Q92913 245 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 MOAP1Q96BY2 351 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 ZNF385AQ96PM9 386 aaKnown RBP8.65□□□□□ -1.02
SF3A3-201ENST00000373019 HIST1H2BLQ99880 126 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 GPR174Q9BXC1 333 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 TRPC4Q9UBN4 977 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 TMED3Q9Y3Q3 217 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 HS3ST3B1Q9Y662 390 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 NUMA1Q14980 2115 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 MTCL1Q9Y4B5 1905 aaKnown RBP8.65□□□□□ -1.02
SF3A3-201ENST00000373019 TRAV18A0A075B6X5 111 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 ELOA3CA0A087WX78 387 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-201ENST00000373019 MTX2O75431 263 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 PTBP3O95758 552 aaKnown RBP8.65□□□□□ -1.02
SF3A3-201ENST00000373019 F3P13726 295 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 NPPBP16860 134 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 SNCAP37840 140 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 KIR3DL2P43630 455 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 ACTC1P68032 377 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 ACTA1P68133 377 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 JOSD1Q15040 202 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-201ENST00000373019 HYAL4Q2M3T9 481 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 FBXO22Q8NEZ5 403 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 ABHD5Q8WTS1 349 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 Q8WTZ3 238 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 SYT4Q9H2B2 425 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 KCNK15Q9H427 330 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 CWH43Q9H720 699 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 SIDT1Q9NXL6 827 aaKnown RBP8.65□□□□□ -1.02
SF3A3-201ENST00000373019 GNG8Q9UK08 70 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 PADI3Q9ULW8 664 aa8.65□□□□□ -1.02
SF3A3-201ENST00000373019 MRPS33Q9Y291 106 aaKnown RBP8.65□□□□□ -1.02
SF3A3-201ENST00000373019 UMAD1C9J7I0 102 aa8.65□□□□□ -1.03
SF3A3-201ENST00000373019 HOXA2O43364 376 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms