RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 SPACA6W5XKT8 324 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 TMEM218A2RU14 115 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 TNFSF14O43557 240 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 GMFGO60234 142 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 FADS1O60427 444 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 RDH16O75452 317 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 PVALBP20472 110 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 TAS2R19P59542 299 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 PRPS1P60891 318 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 OR7A5Q15622 319 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 ZNHIT3Q15649 155 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 ALG10Q5BKT4 473 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 RAB12Q6IQ22 244 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 RHOUQ7L0Q8 258 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 ANKRD9Q96BM1 317 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 SYT4Q9H2B2 425 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 HRASLS2Q9NWW9 162 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 UPB1Q9UBR1 384 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 NDRG3Q9UGV2 375 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 KCNG2Q9UJ96 466 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 CD8AP01732 235 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 HOXA1P49639 335 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 DMWDQ09019 674 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 FAM122BQ7Z309 247 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 MCHR2Q969V1 340 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 ALX4Q9H161 411 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 PIGMQ9H3S5 423 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 TMEM231Q9H6L2 316 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 SCPEP1Q9HB40 452 aa13.38□□□□□ -0.27
COL9A2-202ENST00000372748 CGGBP1Q9UFW8 167 aaPredicted RBP13.38□□□□□ -0.27
COL9A2-202ENST00000372748 TDRD6O60522 2096 aaKnown RBP13.37□□□□□ -0.27
COL9A2-202ENST00000372748 LOC100289279A0A1B0GTE1 492 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 A6NCN8 305 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 OR14I1A6ND48 311 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 OR6C76A6NM76 312 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 TMEM212A6NML5 194 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 CD14P08571 375 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 AVPR2P30518 371 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 ACTBP60709 375 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 ACTG1P63261 375 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 ALG11Q2TAA5 492 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 ASPHD2Q6ICH7 369 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 C3orf33Q6P1S2 294 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 TMEM71Q6P5X7 295 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 ZFP82Q8N141 532 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 CA13Q8N1Q1 262 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 BPIFB2Q8N4F0 458 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 OR9A4Q8NGU2 314 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 PAQR8Q8TEZ7 354 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 LYRM4Q9HD34 91 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 POLE3Q9NRF9 147 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 YBX2Q9Y2T7 364 aaKnown RBP13.37□□□□□ -0.27
COL9A2-202ENST00000372748 SPEGQ15772 3267 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 FITM1A5D6W6 292 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 OR2AT4A6NND4 320 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 OR2F2O95006 317 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 ACTL6AO96019 429 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 CELA2BP08218 269 aaPredicted RBP13.37□□□□□ -0.27
COL9A2-202ENST00000372748 ALOX5APP20292 161 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 TNFRSF4P43489 277 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 CENPAP49450 140 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 OR2F1Q13607 317 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 NPSR1Q6W5P4 371 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 SVBPQ8N300 66 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 CSNK1A1LQ8N752 337 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 EXD3Q8N9H8 876 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 OR1J4Q8NGS1 313 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 ZBTB8AQ96BR9 441 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 SLC6A7Q99884 636 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 MICU1Q9BPX6 476 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 GAREM1Q9H706 876 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 IFT22Q9H7X7 185 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 GRHPRQ9UBQ7 328 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 MSRAQ9UJ68 235 aa13.37□□□□□ -0.27
COL9A2-202ENST00000372748 A0A1B0GTI1 187 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 HLA-DQA2P01906 255 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 CASRP41180 1078 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 RAB13P51153 203 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 SCRN3Q0VDG4 424 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 SQSTM1Q13501 440 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 ERV3-1Q14264 604 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 MOGAT2Q3SYC2 334 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 MESTQ5EB52 335 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 GLYATL3Q5SZD4 288 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 PRAMEF17Q5VTA0 474 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 CCDC36Q8IYA8 594 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 CASTOR1Q8WTX7 329 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 NKD1Q969G9 470 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 C4orf45Q96LM5 186 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 CMSS1Q9BQ75 279 aaKnown RBP13.36□□□□□ -0.27
COL9A2-202ENST00000372748 ATG2AQ2TAZ0 1938 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 DCDC2BA2VCK2 349 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 TMEM235A6NFC5 223 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 ZNF736B4DX44 427 aaPredicted RBP13.36□□□□□ -0.27
COL9A2-202ENST00000372748 EEF1E1-BLOC1S5C9J1V9 151 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 F8W036 122 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 CYB5AP00167 134 aa13.36□□□□□ -0.27
COL9A2-202ENST00000372748 DCNP07585 359 aaKnown RBP13.36□□□□□ -0.27
COL9A2-202ENST00000372748 S1PR1P21453 382 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms