RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SLX4IPQ5VYV7 408 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 TTC23Q5W5X9 447 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ACSM6Q6P461 480 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 IGFL3Q6UXB1 125 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF620Q6ZNG0 422 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 CDK20Q8IZL9 346 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 MARVELD2Q8N4S9 558 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 TMEM251Q8N6I4 163 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 RBMXL3Q8N7X1 1067 aaKnown RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 POMGNT2Q8NAT1 580 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZFP62Q8NB50 900 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 FAM83FQ8NEG4 500 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 OR4Q3Q8NH05 313 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 LIPHQ8WWY8 451 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 SAT2Q96F10 170 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 CNBD2Q96M20 576 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 POTEKPQ9BYX7 375 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 TTTY12Q9BZ98 90 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 OR2B2Q9GZK3 357 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 TMEM185BQ9H7F4 350 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 HHATLQ9HCP6 504 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF226Q9NYT6 803 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 IL20Q9NYY1 176 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 CHRNA9Q9UGM1 479 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 DKKL1Q9UK85 242 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 KLF13Q9Y2Y9 288 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 MRPS18CQ9Y3D5 142 aaKnown RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 ORC6Q9Y5N6 252 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 GMPPBQ9Y5P6 360 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 CDH10Q9Y6N8 788 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 NBEAQ8NFP9 2946 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF407Q9C0G0 2248 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 A0A087WV48 116 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 TRAV17A0A0B4J275 112 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 A0A0J9YW62 118 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 HTR3EA5X5Y0 456 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 H0YC42 278 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 MS4A18H0YCH9 400 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 H3BN98 237 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 KLRC4-KLRK1H3BQV0 150 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 WBP4O75554 376 aaKnown RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 TRAPPC6AO75865 159 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 MBPP02686 304 aaPredicted RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 HPNP05981 417 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 TSPAN19P0C672 248 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 ASAH2BP0C7U1 165 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 SAGP10523 405 aaPredicted RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 CDH2P19022 906 aaPredicted RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 KLK2P20151 261 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 GATA3P23771 443 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 AQP2P41181 271 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 EIF1P41567 113 aaKnown RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 MAGEA5P43359 124 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 MFAP4P55083 255 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 TPD52P55327 224 aaPredicted RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 CLDN15P56746 228 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 RPS4XP62701 263 aaKnown RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 PPIAP62937 165 aaKnown RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 TUBA4AP68366 448 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 MYBPC1Q00872 1141 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 PMP22Q01453 160 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 CD47Q08722 323 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 MYBPHQ13203 477 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 MED21Q13503 144 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 KEAP1Q14145 624 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 FHL2Q14192 279 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 IL13RA2Q14627 380 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 INAQ16352 499 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 HYAL4Q2M3T9 481 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 MS4A18Q3C1V0 323 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 LINC00303Q3SY05 128 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 C9orf152Q5JTZ5 239 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 CLEC12AQ5QGZ9 265 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 RAET1LQ5VY80 246 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 C12orf73Q69YU5 71 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 SMARCD3Q6STE5 483 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 UGT2A3Q6UWM9 527 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 NHLRC1Q6VVB1 395 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 OAFQ86UD1 273 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 IGFN1Q86VF2 1251 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 ENTHD1Q8IYW4 607 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 C10orf53Q8N6V4 93 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 CLDN22Q8N7P3 220 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 LRRC75AQ8NAA5 344 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 ZNF555Q8NEP9 628 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 OR6S1Q8NH40 331 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 OR14L1PQ8NHC6 308 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 RHOXF1Q8NHV9 184 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 SLC25A36Q96CQ1 311 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 TSSK6Q9BXA6 273 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 TEX12Q9BXU0 123 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 OR52D1Q9H346 318 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 ZNF703Q9H7S9 590 aaPredicted RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 SLC25A19Q9HC21 320 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 TAS2R5Q9NYW4 299 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 BOKQ9UMX3 212 aaPredicted RBP3.15□□□□□ -1.9
MCF2-202ENST00000370573 RNF6Q9Y252 685 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 SLC6A5Q9Y345 797 aa3.15□□□□□ -1.9
MCF2-202ENST00000370573 TLN1Q9Y490 2541 aaKnown RBP3.15□□□□□ -1.91
MCF2-202ENST00000370573 DNAJC13O75165 2243 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms